Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs1015244	1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10157448	0.82[MEX][hapmap];1.00[TSI][hapmap];0.86[EUR][1000 genomes]
rs10159003	1.00[TSI][hapmap];0.86[EUR][1000 genomes]
rs10494995	0.82[CEU][hapmap];0.92[EUR][1000 genomes]
rs11580781	0.83[EUR][1000 genomes]
rs11582180	0.83[EUR][1000 genomes]
rs12061587	1.00[CHB][hapmap]
rs12069528	1.00[CHB][hapmap]
rs12069967	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs12121815	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1339408	0.82[MEX][hapmap];0.87[TSI][hapmap];0.81[EUR][1000 genomes]
rs1339409	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1538545	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1538546	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17024410	0.82[MEX][hapmap];1.00[TSI][hapmap];0.86[EUR][1000 genomes]
rs1947364	1.00[CHB][hapmap]
rs2363553	1.00[CHB][hapmap]
rs4284239	0.86[EUR][1000 genomes]
rs4433363	1.00[CHB][hapmap]
rs4573492	1.00[CHB][hapmap]
rs55790910	0.83[ASN][1000 genomes]
rs56233922	0.83[ASN][1000 genomes]
rs61818338	0.83[ASN][1000 genomes]
rs61818341	0.83[ASN][1000 genomes]
rs61818342	0.83[ASN][1000 genomes]
rs61818343	0.83[ASN][1000 genomes]
rs61818346	0.83[ASN][1000 genomes]
rs6665177	1.00[CHB][hapmap]
rs6678565	1.00[TSI][hapmap];0.83[EUR][1000 genomes]
rs7526079	0.80[EUR][1000 genomes]
rs7528475	0.88[YRI][hapmap];0.81[AFR][1000 genomes]
rs7535436	1.00[CHB][hapmap]
rs7551562	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873169	chr1:215264486-215453286	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
2	nsv873170	chr1:215367248-215440975	Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
3	esv2760086	chr1:215370570-215381265	Enhancers Strong transcription Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215374800-215380000	Weak transcription	Osteobl	bone
2	chr1:215375000-215379600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:215375000-215387200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr1:215376400-215378200	Weak transcription	NHDF-Ad	bronchial

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