The 2.0 version of rSNPBase

Variant report

Variant rs7530923
Chromosome Location chr1:93841072-93841073
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93816600-93841800 Weak transcription Brain Cingulate Gyrus brain
2 chr1:93816800-93841200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:93824400-93842000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr1:93826200-93841400 Weak transcription Brain Hippocampus Middle brain
5 chr1:93828200-93842400 Weak transcription Primary hematopoietic stem cells blood
6 chr1:93829200-93843600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:93833200-93841200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:93833200-93841200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:93833200-93841400 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr1:93833400-93841200 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr1:93833400-93841200 Weak transcription Fetal Intestine Large intestine
12 chr1:93833800-93841400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:93834200-93841200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:93834200-93841400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:93834200-93841400 Weak transcription Muscle Satellite Cultured Cells --
16 chr1:93834200-93848200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:93834400-93841400 Weak transcription Fetal Lung lung
18 chr1:93834400-93842400 Weak transcription Primary B cells from cord blood blood
19 chr1:93835800-93850400 Weak transcription Dnd41 blood
20 chr1:93836000-93843400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:93836000-93848000 Weak transcription HSMM muscle
22 chr1:93839400-93841600 Strong transcription Thymus Thymus
23 chr1:93839600-93841200 Strong transcription Primary T cells from cord blood blood
24 chr1:93839800-93841400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:93840000-93841200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:93840200-93841400 Weak transcription Adipose Nuclei Adipose
27 chr1:93840200-93851400 Weak transcription Left Ventricle heart
28 chr1:93840400-93841200 ZNF genes & repeats Placenta Placenta
29 chr1:93840600-93843400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:93840600-93843400 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:93840600-93852400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:93840800-93841600 ZNF genes & repeats Fetal Stomach stomach
33 chr1:93840800-93841800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:93840800-93843600 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:93840800-93843600 Weak transcription Fetal Muscle Trunk muscle
36 chr1:93841000-93841200 Enhancers Spleen Spleen
37 chr1:93841000-93841400 ZNF genes & repeats Fetal Intestine Small intestine
38 chr1:93841000-93841600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
39 chr1:93841000-93841600 ZNF genes & repeats Brain Germinal Matrix brain
40 chr1:93841000-93841800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:93841000-93843200 Weak transcription A549 lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015