Variant report

Variant	rs7538435
Chromosome Location	chr1:211292469-211292470
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11579711	0.81[EUR][1000 genomes]
rs11590375	0.91[ASN][1000 genomes]
rs12144775	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1338349	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1538289	0.84[ASN][1000 genomes]
rs6540658	0.81[EUR][1000 genomes]
rs6540659	0.81[EUR][1000 genomes]
rs6660415	0.81[ASN][1000 genomes]
rs6668674	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7537388	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211280800-211300200	Weak transcription	HSMMtube	muscle
2	chr1:211285600-211299400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr1:211290800-211293200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr1:211291600-211292800	Enhancers	Osteobl	bone
5	chr1:211292000-211292800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr1:211292400-211298000	Weak transcription	A549	lung
7	chr1:211292400-211298200	Weak transcription	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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