The 2.0 version of rSNPBase

Variant report

Variant rs7538968
Chromosome Location chr1:93394108-93394109
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93366400-93409200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:93369000-93394200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:93370400-93395000 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr1:93370600-93395000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:93376000-93395400 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:93376000-93400400 Weak transcription Primary T cells fromperipheralblood blood
7 chr1:93376800-93395400 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr1:93377000-93401400 Weak transcription Dnd41 blood
9 chr1:93381000-93395400 Weak transcription Thymus Thymus
10 chr1:93382200-93394800 Weak transcription Gastric stomach
11 chr1:93383000-93395800 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr1:93383400-93395000 Weak transcription NHLF lung
13 chr1:93383400-93396800 Weak transcription Fetal Stomach stomach
14 chr1:93383600-93394600 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr1:93384800-93399200 Weak transcription Fetal Intestine Small intestine
16 chr1:93385800-93395200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:93387200-93400400 Weak transcription Left Ventricle heart
18 chr1:93388200-93398200 Weak transcription Colon Smooth Muscle Colon
19 chr1:93388200-93408800 Weak transcription Pancreas Pancrea
20 chr1:93388400-93394800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:93389400-93394800 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:93389400-93395000 Weak transcription Liver Liver
23 chr1:93389600-93398400 Weak transcription HMEC breast
24 chr1:93390200-93399200 Weak transcription Adipose Nuclei Adipose
25 chr1:93390400-93394200 Weak transcription Placenta Placenta
26 chr1:93390400-93394800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:93390400-93402200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:93390600-93395400 Weak transcription A549 lung
29 chr1:93390600-93399200 Weak transcription Fetal Heart heart
30 chr1:93390800-93394800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:93390800-93394800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:93390800-93394800 Weak transcription NHDF-Ad bronchial
33 chr1:93390800-93394800 Weak transcription Osteobl bone
34 chr1:93391000-93395400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr1:93391200-93408800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:93392000-93401200 Enhancers Primary B cells from peripheral blood blood
37 chr1:93392200-93394800 Enhancers GM12878-XiMat blood
38 chr1:93392400-93394800 Enhancers Primary B cells from cord blood blood
39 chr1:93393000-93394800 Weak transcription Brain Substantia Nigra brain
40 chr1:93393000-93395600 Enhancers Monocytes-CD14+_RO01746 blood
41 chr1:93393000-93395800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:93393000-93399200 Weak transcription Fetal Brain Male brain
43 chr1:93393600-93395400 Enhancers Primary T cells from cord blood blood
44 chr1:93393800-93394800 Weak transcription Primary monocytes fromperipheralblood blood
45 chr1:93393800-93395000 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015