Variant report

Variant	rs7544159
Chromosome Location	chr1:71034164-71034165
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11209690	1.00[EUR][1000 genomes]
rs12058271	1.00[EUR][1000 genomes]
rs12070022	1.00[EUR][1000 genomes]
rs12074313	1.00[EUR][1000 genomes]
rs12092951	1.00[EUR][1000 genomes]
rs12096502	1.00[EUR][1000 genomes]
rs12098192	1.00[EUR][1000 genomes]
rs1577367	1.00[EUR][1000 genomes]
rs17131342	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17131407	1.00[EUR][1000 genomes]
rs1932059	1.00[EUR][1000 genomes]
rs28415396	1.00[EUR][1000 genomes]
rs2992040	1.00[EUR][1000 genomes]
rs72926266	1.00[EUR][1000 genomes]
rs72928383	1.00[EUR][1000 genomes]
rs72928385	1.00[EUR][1000 genomes]
rs74085288	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7516046	1.00[EUR][1000 genomes]
rs9662819	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1005909	chr1:71028151-71049347	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv945859	chr1:71033919-71039807	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71012600-71059800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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