Variant report

Variant	rs7550680
Chromosome Location	chr1:92902215-92902216
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:92899650..92902559-chr1:92907075..92910056,2	K562	blood:

Extended variants
information (count: 94 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:94)

rs_ID	r²[population]
rs10874637	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10875349	0.90[ASN][1000 genomes]
rs11164226	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11164288	0.90[ASN][1000 genomes]
rs11164312	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11164546	0.90[ASN][1000 genomes]
rs11577572	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11577839	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11578012	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11578400	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11580693	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11585255	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11586355	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11586989	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11588044	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11588153	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11589858	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11803457	0.90[ASN][1000 genomes]
rs12024731	0.90[ASN][1000 genomes]
rs12086394	0.90[ASN][1000 genomes]
rs12094293	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12401372	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12404806	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12406749	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12407622	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12411162	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12724638	0.89[ASN][1000 genomes]
rs12727665	1.00[ASN][1000 genomes]
rs12731923	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12735898	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12740246	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12749317	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12753920	0.89[ASN][1000 genomes]
rs12755781	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12757533	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12759512	0.89[ASN][1000 genomes]
rs1384612	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1384613	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1487536	0.90[ASN][1000 genomes]
rs1542685	0.90[ASN][1000 genomes]
rs17519385	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17519972	0.89[ASN][1000 genomes]
rs17578686	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1809606	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2004814	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2069051	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2391158	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2391162	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3103178	0.90[ASN][1000 genomes]
rs3131814	0.90[ASN][1000 genomes]
rs34090353	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35015161	0.89[ASN][1000 genomes]
rs35580949	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3929737	0.90[ASN][1000 genomes]
rs4393167	0.90[ASN][1000 genomes]
rs4414050	0.90[ASN][1000 genomes]
rs4658294	0.89[ASN][1000 genomes]
rs4658297	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4658298	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4658299	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4658300	0.90[ASN][1000 genomes]
rs4949888	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4970699	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4970713	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58394161	0.83[ASN][1000 genomes]
rs6603962	0.90[ASN][1000 genomes]
rs6603971	0.90[ASN][1000 genomes]
rs6603973	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6603974	0.83[ASN][1000 genomes]
rs6604088	0.90[ASN][1000 genomes]
rs6604090	0.90[ASN][1000 genomes]
rs6661384	0.90[ASN][1000 genomes]
rs6662379	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6662920	0.81[EUR][1000 genomes]
rs6663118	0.81[ASN][1000 genomes]
rs6663278	0.90[ASN][1000 genomes]
rs6663905	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6668803	0.90[ASN][1000 genomes]
rs66758257	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6702267	0.90[ASN][1000 genomes]
rs72720457	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs733012	0.90[ASN][1000 genomes]
rs745793	0.90[ASN][1000 genomes]
rs7511656	0.89[ASN][1000 genomes]
rs7511669	0.89[ASN][1000 genomes]
rs7517541	0.90[ASN][1000 genomes]
rs7518974	0.90[ASN][1000 genomes]
rs7520275	0.90[ASN][1000 genomes]
rs7522081	0.89[ASN][1000 genomes]
rs7524120	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7539757	0.90[ASN][1000 genomes]
rs7543947	0.90[ASN][1000 genomes]
rs9439911	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9943178	0.90[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:92901600-92902600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:92902000-92902400	ZNF genes & repeats	Thymus	Thymus

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