Variant report

Variant rs75542238
Chromosome Location chr15:34501147-34501148
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34454600-34501200 Weak transcription Colonic Mucosa Colon
2 chr15:34477600-34501200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr15:34479400-34501600 Weak transcription Lung lung
4 chr15:34479600-34501800 Weak transcription Spleen Spleen
5 chr15:34486400-34501600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr15:34492200-34501600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr15:34499800-34501200 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr15:34499800-34502600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
9 chr15:34500200-34501200 Enhancers Primary T cells from cord blood blood
10 chr15:34500200-34501600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr15:34500200-34501600 Weak transcription Pancreas Pancrea
12 chr15:34500200-34502600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr15:34500400-34501200 Enhancers Primary monocytes fromperipheralblood blood
14 chr15:34500400-34501200 Flanking Active TSS Muscle Satellite Cultured Cells --
15 chr15:34500400-34501200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
16 chr15:34500400-34501200 Enhancers Thymus Thymus
17 chr15:34500400-34501200 Flanking Active TSS HUVEC blood vessel
18 chr15:34500400-34501400 Enhancers Primary mononuclear cells fromperipheralblood Blood
19 chr15:34500400-34501400 Flanking Active TSS Duodenum Mucosa Duodenum
20 chr15:34500400-34501400 Flanking Active TSS Dnd41 blood
21 chr15:34500400-34501400 Flanking Active TSS Hela-S3 cervix
22 chr15:34500400-34501600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr15:34500400-34502400 Active TSS H1 Cell Line embryonic stem cell
24 chr15:34500400-34502400 Active TSS HUES48 Cell Line embryonic stem cell
25 chr15:34500400-34502600 Active TSS HSMM muscle
26 chr15:34500400-34502600 Active TSS HSMMtube muscle
27 chr15:34500600-34501200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
28 chr15:34500600-34501200 Flanking Active TSS A549 lung
29 chr15:34500600-34501400 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr15:34500600-34501400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr15:34500600-34501600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr15:34500600-34501600 Weak transcription Esophagus oesophagus
33 chr15:34500600-34502200 Active TSS ES-I3 Cell Line embryonic stem cell
34 chr15:34500600-34502200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr15:34500600-34502400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr15:34500600-34502400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr15:34500600-34502400 Active TSS Fetal Muscle Leg muscle
38 chr15:34500600-34502400 Active TSS HMEC breast
39 chr15:34500600-34502400 Active TSS NHDF-Ad bronchial
40 chr15:34500600-34502600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr15:34500600-34502600 Active TSS Placenta Placenta
42 chr15:34500600-34502600 Active TSS GM12878-XiMat blood
43 chr15:34500600-34502800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
44 chr15:34500800-34501200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
45 chr15:34500800-34501200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
46 chr15:34500800-34501200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr15:34500800-34501200 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
48 chr15:34500800-34501200 Enhancers Primary T helper cells fromperipheralblood blood
49 chr15:34500800-34501200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
50 chr15:34500800-34501200 Flanking Active TSS Fetal Brain Female brain

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