Variant report

Variant rs7561870
Chromosome Location chr2:183729980-183729981
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:183719600-183730800 Weak transcription Psoas Muscle Psoas
2 chr2:183722200-183730800 Weak transcription Placenta Placenta
3 chr2:183723800-183730600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr2:183724200-183730800 Weak transcription Right Atrium heart
5 chr2:183726000-183730800 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr2:183727200-183730800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr2:183727200-183731000 Weak transcription Liver Liver
8 chr2:183727800-183730600 Weak transcription Right Ventricle heart
9 chr2:183727800-183730800 Weak transcription Esophagus oesophagus
10 chr2:183728200-183731000 Weak transcription Pancreas Pancrea
11 chr2:183728200-183732400 Active TSS Aorta Aorta
12 chr2:183728600-183730400 Enhancers Colon Smooth Muscle Colon
13 chr2:183728800-183730000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr2:183728800-183730800 Active TSS Skeletal Muscle Male skeletal muscle
15 chr2:183729200-183730000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr2:183729200-183730000 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr2:183729200-183730400 Active TSS Stomach Smooth Muscle stomach
18 chr2:183729200-183730600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr2:183729200-183730800 Weak transcription Rectal Smooth Muscle rectum
20 chr2:183729200-183731200 Active TSS Rectal Mucosa Donor 29 rectum
21 chr2:183729200-183732400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr2:183729400-183730200 Enhancers Fetal Brain Female brain
23 chr2:183729400-183730800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr2:183729400-183731000 Enhancers Fetal Brain Male brain
25 chr2:183729600-183730800 Active TSS Fetal Stomach stomach
26 chr2:183729600-183732400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr2:183729800-183730000 Enhancers Fetal Intestine Small intestine
28 chr2:183729800-183730800 Enhancers Cortex derived primary cultured neurospheres brain
29 chr2:183729800-183732400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
30 chr2:183729800-183732400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell

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