Variant report

Variant	rs759669
Chromosome Location	chr2:37386278-37386279
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:37370415..37372075-chr2:37384482..37387450,2	K562	blood:
2	chr2:37385156..37387851-chr2:37415682..37418467,2	K562	blood:
3	chr2:37382848..37386165-chr2:37386168..37391618,9	MCF-7	breast:
4	chr2:37381640..37387428-chr2:37421417..37425727,6	MCF-7	breast:
5	chr2:37375493..37378915-chr2:37383921..37387868,3	K562	blood:
6	chr2:37383967..37386325-chr2:37457482..37459560,2	MCF-7	breast:
7	chr2:37385569..37388130-chr2:37422191..37423882,2	K562	blood:
8	chr2:37382658..37387385-chr2:37421093..37425812,6	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000224891	Chromatin interaction
ENSG00000138068	Chromatin interaction
ENSG00000218739	Chromatin interaction
ENSG00000115816	Chromatin interaction
ENSG00000055332	Chromatin interaction
ENSG00000003509	Chromatin interaction
ENSG00000233159	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10177315	1.00[ASN][1000 genomes]
rs10194972	1.00[ASN][1000 genomes]
rs11892108	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11892180	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11894496	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13388882	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13425846	1.00[ASN][1000 genomes]
rs2307472	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2307474	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2372443	1.00[ASN][1000 genomes]
rs2373188	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3856498	1.00[ASN][1000 genomes]
rs4233920	1.00[ASN][1000 genomes]
rs4648150	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648153	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648156	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648158	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648160	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648163	0.86[EUR][1000 genomes]
rs4648166	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648169	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648170	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648171	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648175	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648190	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648191	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648196	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648199	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4648212	1.00[ASN][1000 genomes]
rs4648216	1.00[ASN][1000 genomes]
rs4648218	1.00[ASN][1000 genomes]
rs4648219	1.00[ASN][1000 genomes]
rs4648234	1.00[ASN][1000 genomes]
rs4648237	1.00[ASN][1000 genomes]
rs55679447	1.00[ASN][1000 genomes]
rs55939105	1.00[ASN][1000 genomes]
rs62621388	1.00[ASN][1000 genomes]
rs6544054	1.00[ASN][1000 genomes]
rs6544055	1.00[ASN][1000 genomes]
rs6720519	1.00[ASN][1000 genomes]
rs6726403	1.00[ASN][1000 genomes]
rs6734153	1.00[ASN][1000 genomes]
rs6740307	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7568925	1.00[ASN][1000 genomes]
rs7590377	1.00[ASN][1000 genomes]
rs759668	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37384800-37387200	Weak transcription	Esophagus	oesophagus
2	chr2:37385000-37386600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr2:37385000-37386600	Enhancers	Brain Angular Gyrus	brain
4	chr2:37385000-37386600	Enhancers	Brain Cingulate Gyrus	brain
5	chr2:37385000-37387200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr2:37385000-37388400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr2:37385800-37389000	Weak transcription	Primary neutrophils fromperipheralblood	blood

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