Variant report

Variant	rs7622091
Chromosome Location	chr3:25147497-25147498
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1603984	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1603986	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34850898	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4858705	0.99[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4858707	0.82[ASN][1000 genomes]
rs6550950	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs66831722	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6763490	0.83[EUR][1000 genomes]
rs6778399	0.83[EUR][1000 genomes]
rs9877729	0.83[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25144800-25147600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr3:25146800-25147600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr3:25147000-25147600	Enhancers	Rectal Smooth Muscle	rectum
4	chr3:25147000-25147800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr3:25147000-25147800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr3:25147200-25147800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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