Variant report

Variant	rs76434040
Chromosome Location	chr8:50009142-50009143
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025068	chr8:49953397-50370208	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	esv3401785	chr8:49986448-50018640	Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
3	esv3383502	chr8:49991448-50020707	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv1023325	chr8:49994793-50050571	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv3507579	chr8:50008449-50010347	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv17024	chr8:50008794-50009344	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv2398826	chr8:50009014-50009504	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3325939	chr8:50009086-50009425	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3507578	chr8:50009090-50009446	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3479180	chr8:50009097-50009409	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3507580	chr8:50009102-50009375	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3507577	chr8:50009104-50009374	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3479181	chr8:50009104-50009403	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv3479179	chr8:50009128-50009362	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3507581	chr8:50009132-50009384	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50005200-50009200	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr8:50008200-50015400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr8:50008200-50015600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:50009000-50010000	Enhancers	iPS-18 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links