Variant report

Variant rs7654108
Chromosome Location chr4:48177592-48177593
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:48157800-48181000 Weak transcription Pancreas Pancrea
2 chr4:48158400-48180600 Weak transcription Spleen Spleen
3 chr4:48158400-48181800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr4:48158400-48190000 Weak transcription Aorta Aorta
5 chr4:48158600-48179200 Weak transcription Duodenum Mucosa Duodenum
6 chr4:48158600-48179400 Weak transcription Fetal Intestine Small intestine
7 chr4:48158800-48180200 Weak transcription Fetal Thymus thymus
8 chr4:48166400-48179600 Weak transcription Thymus Thymus
9 chr4:48169000-48180600 Weak transcription Esophagus oesophagus
10 chr4:48169000-48190000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr4:48170600-48181200 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr4:48171200-48181600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr4:48173800-48188400 Weak transcription Lung lung
14 chr4:48174400-48178000 Genic enhancers Primary hematopoietic stem cells short term culture blood
15 chr4:48175400-48178800 Enhancers ES-I3 Cell Line embryonic stem cell
16 chr4:48175600-48178000 Enhancers HUES64 Cell Line embryonic stem cell
17 chr4:48175600-48180600 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr4:48175800-48191600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr4:48176000-48178400 Weak transcription Rectal Smooth Muscle rectum
20 chr4:48176000-48180600 Weak transcription Primary monocytes fromperipheralblood blood
21 chr4:48176000-48185200 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr4:48176000-48185200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr4:48176000-48185400 Weak transcription H1 Cell Line embryonic stem cell
24 chr4:48176200-48185200 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr4:48176400-48177600 Weak transcription Muscle Satellite Cultured Cells --
26 chr4:48176600-48179400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr4:48176800-48177600 Strong transcription Liver Liver
28 chr4:48176800-48177800 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr4:48176800-48178000 Strong transcription Primary hematopoietic stem cells blood
30 chr4:48176800-48178000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr4:48177000-48177600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
32 chr4:48177000-48177600 Transcr. at gene 5' and 3' GM12878-XiMat blood
33 chr4:48177000-48177600 Enhancers HSMM muscle
34 chr4:48177000-48177600 Genic enhancers K562 blood
35 chr4:48177000-48178200 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr4:48177000-48178200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr4:48177000-48178200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr4:48177000-48178200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr4:48177200-48177600 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr4:48177200-48178000 Enhancers HUES6 Cell Line embryonic stem cell
41 chr4:48177200-48178200 Enhancers HUVEC blood vessel
42 chr4:48177400-48177600 Enhancers Right Atrium heart
43 chr4:48177400-48177800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr4:48177400-48177800 Enhancers Hela-S3 cervix
45 chr4:48177400-48178000 Strong transcription Primary B cells from peripheral blood blood
46 chr4:48177400-48178000 Enhancers Primary T cells from cord blood blood
47 chr4:48177400-48178000 Enhancers Pancreatic Islets Pancreatic Islet
48 chr4:48177400-48178200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr4:48177400-48178200 Enhancers A549 lung
50 chr4:48177400-48178200 Enhancers HMEC breast

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