Variant report

Variant	rs7665568
Chromosome Location	chr4:81501159-81501160
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs17004897	1.00[AMR][1000 genomes]
rs17004938	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17004949	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17004951	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1874335	1.00[AMR][1000 genomes]
rs56062404	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58112950	1.00[AMR][1000 genomes]
rs58711748	0.91[AFR][1000 genomes]
rs59881454	0.91[AFR][1000 genomes]
rs60366641	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60660007	1.00[AMR][1000 genomes]
rs60770229	0.84[AFR][1000 genomes]
rs6816294	0.91[AFR][1000 genomes]
rs6847820	0.82[AFR][1000 genomes]
rs73829294	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73832425	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73832427	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73832428	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73832429	0.91[AFR][1000 genomes]
rs7656162	0.91[AFR][1000 genomes]
rs7669743	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7690311	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7699161	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs966860	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs966861	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002776	chr4:81480374-81802614	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv537154	chr4:81480374-81802614	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81501000-81501200	Weak transcription	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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