Variant report

Variant	rs7695414
Chromosome Location	chr4:81488436-81488437
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:62)

rs_ID	r²[population]
rs10034974	0.89[ASN][1000 genomes]
rs1038532	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10857174	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11099253	0.89[ASN][1000 genomes]
rs11731831	0.84[ASN][1000 genomes]
rs11937407	0.86[ASN][1000 genomes]
rs11940032	0.88[ASN][1000 genomes]
rs11944437	0.88[ASN][1000 genomes]
rs11944925	0.90[ASN][1000 genomes]
rs12510415	0.85[ASN][1000 genomes]
rs12647313	0.84[ASN][1000 genomes]
rs12650570	0.90[ASN][1000 genomes]
rs13111449	0.85[ASN][1000 genomes]
rs13136169	0.81[ASN][1000 genomes]
rs13141564	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13142845	0.89[ASN][1000 genomes]
rs13152520	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1352076	0.86[ASN][1000 genomes]
rs1385890	0.86[ASN][1000 genomes]
rs1486022	0.86[ASN][1000 genomes]
rs1495489	0.90[ASN][1000 genomes]
rs1495493	0.89[ASN][1000 genomes]
rs1843563	0.89[ASN][1000 genomes]
rs1872576	0.91[ASN][1000 genomes]
rs1874336	0.90[ASN][1000 genomes]
rs1905967	0.85[ASN][1000 genomes]
rs1908550	0.90[ASN][1000 genomes]
rs1971301	0.88[ASN][1000 genomes]
rs2132267	0.90[ASN][1000 genomes]
rs2132268	0.90[ASN][1000 genomes]
rs2132269	0.90[ASN][1000 genomes]
rs2132271	0.89[ASN][1000 genomes]
rs2172878	0.85[ASN][1000 genomes]
rs28493682	0.99[ASN][1000 genomes]
rs2867781	0.89[ASN][1000 genomes]
rs2867784	0.82[EUR][1000 genomes]
rs2903671	0.89[ASN][1000 genomes]
rs34269363	0.84[ASN][1000 genomes]
rs4693494	0.89[ASN][1000 genomes]
rs4693495	0.89[ASN][1000 genomes]
rs4693537	0.88[ASN][1000 genomes]
rs5019005	0.90[ASN][1000 genomes]
rs55940038	0.87[ASN][1000 genomes]
rs6534967	0.86[ASN][1000 genomes]
rs6535016	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6813764	0.87[ASN][1000 genomes]
rs6823400	0.91[ASN][1000 genomes]
rs6826104	0.86[ASN][1000 genomes]
rs6827369	0.89[ASN][1000 genomes]
rs6831485	0.87[ASN][1000 genomes]
rs6832233	0.87[ASN][1000 genomes]
rs6835442	0.86[ASN][1000 genomes]
rs7658613	0.83[ASN][1000 genomes]
rs7660815	0.86[ASN][1000 genomes]
rs7666589	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7674255	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7685226	0.90[ASN][1000 genomes]
rs7686715	0.94[ASN][1000 genomes]
rs7693460	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9307720	0.89[ASN][1000 genomes]
rs967941	0.95[ASN][1000 genomes]
rs9993620	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002776	chr4:81480374-81802614	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv537154	chr4:81480374-81802614	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81488400-81494800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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