The 2.0 version of rSNPBase

Variant report

Variant rs7717284
Chromosome Location chr5:60372109-60372110
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60326000-60400800 Weak transcription Left Ventricle heart
2 chr5:60347200-60379200 Weak transcription Ovary ovary
3 chr5:60350600-60378600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr5:60350800-60396200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr5:60362800-60377200 Weak transcription Psoas Muscle Psoas
6 chr5:60365200-60372400 Weak transcription Dnd41 blood
7 chr5:60365600-60376400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr5:60365600-60387000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr5:60366400-60397400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr5:60367200-60382200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr5:60367400-60379400 Weak transcription HMEC breast
12 chr5:60367400-60385200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr5:60367400-60386800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr5:60367400-60399400 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr5:60367600-60372200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr5:60367600-60372600 Weak transcription NHEK skin
17 chr5:60367600-60378400 Weak transcription Primary T cells from cord blood blood
18 chr5:60367600-60380000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr5:60367600-60380000 Weak transcription Liver Liver
20 chr5:60367600-60398400 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr5:60367800-60372400 Weak transcription Primary hematopoietic stem cells blood
22 chr5:60367800-60372400 Weak transcription NH-A brain
23 chr5:60367800-60403800 Weak transcription Primary B cells from cord blood blood
24 chr5:60368000-60372400 Weak transcription Brain Anterior Caudate brain
25 chr5:60368000-60372600 Weak transcription A549 lung
26 chr5:60368200-60374800 Weak transcription Fetal Intestine Large intestine
27 chr5:60368200-60377600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr5:60368200-60390600 Weak transcription Fetal Intestine Small intestine
29 chr5:60368200-60397600 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr5:60368200-60402000 Weak transcription Stomach Smooth Muscle stomach
31 chr5:60368400-60390200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr5:60368600-60378400 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr5:60368600-60381200 Weak transcription K562 blood
34 chr5:60369000-60400200 Weak transcription Fetal Muscle Trunk muscle
35 chr5:60369400-60388200 Weak transcription Gastric stomach
36 chr5:60369600-60378800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr5:60369800-60396400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr5:60370000-60372800 Weak transcription Primary B cells from peripheral blood blood
39 chr5:60370000-60377600 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr5:60370200-60395600 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr5:60370800-60372400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr5:60371000-60372400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr5:60371200-60372600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr5:60371400-60372600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr5:60371400-60382800 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr5:60371600-60398000 Weak transcription HSMM muscle
47 chr5:60371800-60387400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015