The 2.0 version of rSNPBase

Variant report

Variant rs7717539
Chromosome Location chr5:95165119-95165120
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:95159800-95169800 Weak transcription Fetal Kidney kidney
2 chr5:95160200-95169800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr5:95160600-95168800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:95160600-95170000 Weak transcription Right Atrium heart
5 chr5:95160600-95170400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr5:95160800-95166400 Weak transcription Gastric stomach
7 chr5:95160800-95168000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr5:95160800-95168200 Weak transcription Primary hematopoietic stem cells blood
9 chr5:95160800-95168800 Weak transcription Placenta Placenta
10 chr5:95160800-95169000 Weak transcription Psoas Muscle Psoas
11 chr5:95160800-95169800 Weak transcription Fetal Heart heart
12 chr5:95160800-95169800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr5:95161400-95168400 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr5:95161600-95171400 Weak transcription Small Intestine intestine
15 chr5:95161800-95165200 Weak transcription Colon Smooth Muscle Colon
16 chr5:95161800-95168000 Weak transcription GM12878-XiMat blood
17 chr5:95161800-95168800 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr5:95161800-95169800 Weak transcription Thymus Thymus
19 chr5:95161800-95170000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr5:95162000-95168000 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr5:95162000-95168200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr5:95162400-95168000 Weak transcription Primary T cells fromperipheralblood blood
23 chr5:95162400-95169600 Weak transcription Hela-S3 cervix
24 chr5:95163600-95168000 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr5:95164000-95167400 Weak transcription Primary T cells from cord blood blood
26 chr5:95164000-95167400 Weak transcription Dnd41 blood
27 chr5:95164200-95168000 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr5:95164200-95168400 Weak transcription A549 lung
29 chr5:95164200-95168600 Weak transcription Stomach Mucosa stomach
30 chr5:95164200-95171400 Weak transcription Spleen Spleen
31 chr5:95164400-95168400 Weak transcription Primary B cells from cord blood blood
32 chr5:95164400-95168400 Weak transcription Liver Liver
33 chr5:95164400-95169000 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr5:95164400-95169800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr5:95164600-95168800 Weak transcription Fetal Thymus thymus
36 chr5:95164600-95169000 Weak transcription Duodenum Mucosa Duodenum
37 chr5:95164600-95169800 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr5:95164800-95166000 Weak transcription K562 blood
39 chr5:95164800-95167800 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr5:95164800-95168000 Weak transcription Primary monocytes fromperipheralblood blood
41 chr5:95164800-95168000 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr5:95164800-95168800 Weak transcription HepG2 liver
43 chr5:95164800-95169000 Weak transcription Fetal Intestine Large intestine
44 chr5:95164800-95169600 Weak transcription Fetal Intestine Small intestine
45 chr5:95164800-95170200 Weak transcription Colonic Mucosa Colon
46 chr5:95164800-95170400 Weak transcription Lung lung
47 chr5:95165000-95166200 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015