Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:92110796..92112626-chr5:92114304..92117125,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11750913	0.81[ASW][hapmap]
rs17082555	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56715581	1.00[EUR][1000 genomes]
rs59258692	1.00[EUR][1000 genomes]
rs59369031	1.00[EUR][1000 genomes]
rs60126216	1.00[EUR][1000 genomes]
rs61675340	1.00[EUR][1000 genomes]
rs6898957	1.00[EUR][1000 genomes]
rs73140852	1.00[EUR][1000 genomes]
rs73140856	1.00[EUR][1000 genomes]
rs73140858	1.00[EUR][1000 genomes]
rs73140859	1.00[EUR][1000 genomes]
rs73140863	1.00[EUR][1000 genomes]
rs73140864	1.00[EUR][1000 genomes]
rs73140868	1.00[EUR][1000 genomes]
rs73140899	1.00[EUR][1000 genomes]
rs73140901	1.00[EUR][1000 genomes]
rs73142810	1.00[EUR][1000 genomes]
rs73142812	1.00[EUR][1000 genomes]
rs73142822	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015770	chr5:91911877-92498264	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv830398	chr5:92102826-92281331	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:92113400-92118000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr5:92115800-92116600	Enhancers	H1 Cell Line	embryonic stem cell
3	chr5:92116400-92116600	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr5:92116400-92118000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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