Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10498801	1.00[CHB][hapmap];0.81[JPT][hapmap]
rs10948894	1.00[CHB][hapmap];0.81[CHD][hapmap];0.81[JPT][hapmap]
rs12526414	1.00[CHB][hapmap];0.84[CHD][hapmap];0.81[JPT][hapmap]
rs12662510	0.82[CHB][hapmap]
rs12663056	1.00[CHB][hapmap]
rs13343017	1.00[CHB][hapmap]
rs2998995	0.82[ASN][1000 genomes]
rs3006854	1.00[CHB][hapmap];0.84[CHD][hapmap];0.81[JPT][hapmap]
rs3122148	0.88[CHB][hapmap];0.81[CHD][hapmap]
rs3122149	0.83[CHB][hapmap]
rs3122151	1.00[CHB][hapmap];0.80[JPT][hapmap]
rs3122153	0.88[CHB][hapmap]
rs3134689	0.94[CHB][hapmap]
rs3134696	1.00[CHB][hapmap];0.84[CHD][hapmap];0.81[JPT][hapmap]
rs3134699	1.00[CHB][hapmap];0.81[CHD][hapmap];0.81[JPT][hapmap]
rs3134701	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs3134708	0.88[CHB][hapmap]
rs4236127	1.00[CHB][hapmap]
rs55873439	0.82[ASN][1000 genomes]
rs60550710	0.81[ASN][1000 genomes]
rs62418310	0.81[ASN][1000 genomes]
rs62418311	0.82[ASN][1000 genomes]
rs6922310	0.88[CHB][hapmap]
rs6927478	0.94[CHB][hapmap];0.94[JPT][hapmap]
rs6937705	1.00[CHB][hapmap]
rs6937878	1.00[CHB][hapmap];0.81[JPT][hapmap]
rs7775741	0.83[ASN][1000 genomes]
rs9367622	0.94[CHB][hapmap]
rs9396060	0.82[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016461	chr6:55038131-55129663	Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:55048200-55051000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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