Variant report

Variant	rs77764419
Chromosome Location	chr1:210658824-210658825
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv4376	chr1:210627620-210672326	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv275540	chr1:210658336-210663000	Enhancers Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210639400-210668200	Weak transcription	Primary T cells from cord blood	blood
2	chr1:210640000-210660400	Weak transcription	Aorta	Aorta
3	chr1:210643200-210674000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:210648800-210660400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr1:210653800-210678800	Weak transcription	HSMM	muscle
6	chr1:210654400-210659000	Weak transcription	HSMMtube	muscle
7	chr1:210657000-210660400	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr1:210657000-210663600	Weak transcription	Brain Cingulate Gyrus	brain
9	chr1:210657000-210669600	Weak transcription	Brain Substantia Nigra	brain
10	chr1:210657800-210659800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr1:210658000-210660200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr1:210658800-210663000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr1:210658800-210664800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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