Variant report

Variant	rs7777200
Chromosome Location	chr7:105247470-105247471
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:105247461..105250201-chr7:105251005..105253745,3	MCF-7	breast:

rs_ID	r²[population]
rs12535264	0.83[CHB][hapmap];0.84[CHD][hapmap]
rs16871759	0.80[CHD][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs17150293	0.83[CHB][hapmap];0.84[CHD][hapmap]

Chromatin state (count:93 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:105222200-105253000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr7:105237600-105251000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:105237800-105250800	Weak transcription	Brain Anterior Caudate	brain
4	chr7:105238000-105252600	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr7:105239400-105289000	Weak transcription	Right Atrium	heart
6	chr7:105240400-105284400	Weak transcription	HSMMtube	muscle
7	chr7:105241800-105251200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr7:105241800-105252800	Weak transcription	Placenta	Placenta
9	chr7:105241800-105253200	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr7:105241800-105253400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr7:105242000-105252600	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr7:105242000-105253800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr7:105242000-105254200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr7:105242200-105251200	Weak transcription	Esophagus	oesophagus
15	chr7:105242200-105254000	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr7:105242200-105263400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr7:105242200-105273800	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr7:105242400-105247600	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr7:105242400-105252600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
20	chr7:105242400-105254600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr7:105242800-105253200	Weak transcription	Rectal Mucosa Donor 29	rectum
22	chr7:105243000-105252800	Weak transcription	Spleen	Spleen
23	chr7:105243200-105253800	Weak transcription	Adipose Nuclei	Adipose
24	chr7:105243200-105253800	Weak transcription	Fetal Lung	lung
25	chr7:105243200-105253800	Weak transcription	NHLF	lung
26	chr7:105243200-105280200	Weak transcription	Stomach Mucosa	stomach
27	chr7:105243400-105251000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr7:105243400-105252400	Weak transcription	Stomach Smooth Muscle	stomach
29	chr7:105243400-105252800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr7:105243400-105253000	Weak transcription	Liver	Liver
31	chr7:105243400-105289200	Weak transcription	NHDF-Ad	bronchial
32	chr7:105243600-105247800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr7:105244000-105261000	Weak transcription	Fetal Brain Male	brain
34	chr7:105244200-105253000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr7:105244400-105251000	Weak transcription	Brain Inferior Temporal Lobe	brain
36	chr7:105244400-105253600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
37	chr7:105244400-105254400	Weak transcription	Left Ventricle	heart
38	chr7:105244600-105251200	Weak transcription	Brain Angular Gyrus	brain
39	chr7:105244600-105252600	Weak transcription	Primary T cells fromperipheralblood	blood
40	chr7:105244600-105253400	Weak transcription	Skeletal Muscle Male	skeletal muscle
41	chr7:105244600-105254200	Weak transcription	Aorta	Aorta
42	chr7:105244600-105254200	Weak transcription	Skeletal Muscle Female	skeletal muscle
43	chr7:105245000-105254000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
44	chr7:105245200-105250800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr7:105245400-105254000	Weak transcription	Pancreas	Pancrea
46	chr7:105245600-105247800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr7:105245600-105252400	Weak transcription	Primary T helper cells PMA-I stimulated	--
48	chr7:105245600-105253800	Weak transcription	Colon Smooth Muscle	Colon
49	chr7:105245600-105253800	Weak transcription	Gastric	stomach
50	chr7:105245600-105254000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--

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