Variant report

Variant rs778459
Chromosome Location chr3:23445909-23445910
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23431400-23447800 Weak transcription H9 Cell Line embryonic stem cell
2 chr3:23432200-23452600 Weak transcription Aorta Aorta
3 chr3:23433800-23459600 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr3:23435000-23448200 Weak transcription Psoas Muscle Psoas
5 chr3:23438600-23448200 Weak transcription Muscle Satellite Cultured Cells --
6 chr3:23442200-23446800 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr3:23442400-23448200 Weak transcription Fetal Heart heart
8 chr3:23444000-23447000 Enhancers Primary B cells from cord blood blood
9 chr3:23444200-23446400 Enhancers GM12878-XiMat blood
10 chr3:23444200-23447400 Enhancers Primary B cells from peripheral blood blood
11 chr3:23444600-23459400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr3:23444600-23467000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr3:23445000-23463800 Weak transcription HSMMtube muscle
14 chr3:23445200-23449400 Weak transcription Left Ventricle heart
15 chr3:23445400-23446000 Enhancers Brain Substantia Nigra brain
16 chr3:23445400-23446000 Enhancers Skeletal Muscle Male skeletal muscle
17 chr3:23445400-23446400 Enhancers HUVEC blood vessel
18 chr3:23445400-23447000 Enhancers Hela-S3 cervix
19 chr3:23445600-23446400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr3:23445800-23446000 Enhancers Colon Smooth Muscle Colon
21 chr3:23445800-23446600 Enhancers Brain Inferior Temporal Lobe brain

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