Variant report

Variant	rs7792406
Chromosome Location	chr7:126691793-126691794
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs1006728	1.00[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap]
rs10225883	0.93[CEU][hapmap];0.94[CHB][hapmap];0.93[JPT][hapmap]
rs10954144	0.80[CHB][hapmap];0.93[JPT][hapmap]
rs11563708	0.80[JPT][hapmap]
rs11563717	0.80[JPT][hapmap]
rs11563719	0.93[JPT][hapmap]
rs11563728	0.85[CHB][hapmap];0.93[JPT][hapmap]
rs11760208	0.93[JPT][hapmap]
rs1361963	0.80[JPT][hapmap]
rs1419424	0.93[JPT][hapmap]
rs1419446	0.93[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap]
rs17864136	0.80[JPT][hapmap]
rs17864137	0.80[JPT][hapmap]
rs1894731	0.87[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap]
rs2010184	0.81[CHB][hapmap];0.93[JPT][hapmap]
rs2237780	0.90[CHB][hapmap];0.93[JPT][hapmap]
rs2237784	0.85[CHB][hapmap];0.93[JPT][hapmap]
rs2237786	0.85[CHB][hapmap];0.93[JPT][hapmap]
rs2237789	0.93[JPT][hapmap]
rs2237790	0.93[JPT][hapmap]
rs2237791	0.93[JPT][hapmap]
rs2237792	0.80[JPT][hapmap]
rs2283090	0.87[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap]
rs2283091	0.87[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap]
rs2283092	0.87[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap]
rs2283093	0.85[CHB][hapmap];0.93[JPT][hapmap]
rs2283095	0.85[CHB][hapmap];0.93[JPT][hapmap]
rs2283096	0.80[JPT][hapmap]
rs2299525	1.00[CEU][hapmap];0.84[CHB][hapmap];0.93[JPT][hapmap]
rs2299530	0.81[CHB][hapmap];0.93[JPT][hapmap]
rs2299535	0.93[JPT][hapmap]
rs2299537	0.93[JPT][hapmap]
rs2299538	0.93[JPT][hapmap]
rs2299539	0.80[JPT][hapmap]
rs2299541	0.93[JPT][hapmap]
rs3808122	1.00[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap]
rs3808126	1.00[CEU][hapmap]
rs3808127	1.00[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap]
rs4141410	0.86[JPT][hapmap]
rs6942923	0.87[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap]
rs6949620	0.80[JPT][hapmap]
rs6964926	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs6975798	0.80[JPT][hapmap]
rs6978939	0.87[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap]
rs6979287	0.81[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap]
rs6979572	0.86[JPT][hapmap]
rs7778276	0.80[JPT][hapmap]
rs7778308	0.90[CHB][hapmap];0.93[JPT][hapmap]
rs7791539	0.93[JPT][hapmap]
rs951111	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831121	chr7:126593363-126774413	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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