Variant report

Variant	rs7793664
Chromosome Location	chr7:105464252-105464253
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:105463470..105465747-chr7:105472963..105475389,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs510382	1.00[AMR][1000 genomes]
rs533332	1.00[AMR][1000 genomes]
rs6466076	1.00[YRI][hapmap]
rs6950432	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6958203	1.00[AMR][1000 genomes]
rs6964480	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6977858	1.00[AMR][1000 genomes]
rs7786261	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027213	chr7:105438610-106022869	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:105430200-105479200	Weak transcription	Aorta	Aorta
2	chr7:105446400-105471200	Weak transcription	Lung	lung
3	chr7:105446800-105470000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr7:105446800-105470200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr7:105446800-105471200	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr7:105447000-105470000	Weak transcription	Ovary	ovary
7	chr7:105447200-105470200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr7:105447600-105470000	Weak transcription	NH-A	brain
9	chr7:105447800-105470600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr7:105448600-105465000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr7:105448800-105470400	Weak transcription	Fetal Muscle Leg	muscle
12	chr7:105449000-105479200	Weak transcription	Esophagus	oesophagus
13	chr7:105450200-105466400	Weak transcription	NHLF	lung
14	chr7:105450400-105470200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr7:105450800-105470200	Weak transcription	NHEK	skin
16	chr7:105452400-105464600	Weak transcription	Fetal Intestine Large	intestine
17	chr7:105452400-105467400	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr7:105452400-105471200	Weak transcription	Duodenum Mucosa	Duodenum
19	chr7:105452600-105470800	Weak transcription	Small Intestine	intestine
20	chr7:105452600-105471200	Weak transcription	Right Ventricle	heart
21	chr7:105452800-105465800	Weak transcription	Liver	Liver
22	chr7:105452800-105470400	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr7:105456200-105470200	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr7:105456600-105467400	Weak transcription	HUVEC	blood vessel
25	chr7:105456600-105470000	Weak transcription	HUES6 Cell Line	embryonic stem cell
26	chr7:105456800-105467200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr7:105457200-105478000	Weak transcription	Brain Anterior Caudate	brain
28	chr7:105457400-105468600	Weak transcription	Spleen	Spleen
29	chr7:105457400-105469800	Weak transcription	Stomach Smooth Muscle	stomach
30	chr7:105457400-105470000	Weak transcription	HUES64 Cell Line	embryonic stem cell
31	chr7:105457600-105465600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr7:105457800-105466200	Weak transcription	Colon Smooth Muscle	Colon
33	chr7:105457800-105469200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr7:105457800-105470000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
35	chr7:105458000-105470000	Weak transcription	HUES48 Cell Line	embryonic stem cell
36	chr7:105458200-105465800	Weak transcription	Primary monocytes fromperipheralblood	blood
37	chr7:105458200-105466400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr7:105458200-105468600	Weak transcription	Fetal Lung	lung
39	chr7:105459200-105470600	Weak transcription	Cortex derived primary cultured neurospheres	brain
40	chr7:105459200-105473200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
41	chr7:105460200-105471000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr7:105460600-105464400	Weak transcription	Placenta	Placenta
43	chr7:105461000-105471200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr7:105461200-105466200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr7:105461400-105465600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr7:105461400-105465800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr7:105461400-105468400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr7:105461400-105469800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr7:105461600-105465200	Weak transcription	Fetal Intestine Small	intestine
50	chr7:105461600-105473200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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