Variant report

Variant	rs7807589
Chromosome Location	chr7:147446431-147446432
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:147446008..147448178-chr7:147448478..147451242,2	K562	blood:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10231699	0.82[YRI][hapmap]
rs10245935	0.81[YRI][hapmap]
rs10274524	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10280155	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11765619	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs11769191	0.81[CEU][hapmap]
rs1177004	0.82[CEU][hapmap]
rs12056208	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12112564	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12113689	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12703960	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1404731	0.81[CEU][hapmap]
rs1404733	0.83[CEU][hapmap]
rs1467331	1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs16883690	0.80[YRI][hapmap]
rs1917617	1.00[CHB][hapmap]
rs2140812	1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs34645698	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58676850	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6464838	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs73475064	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73475065	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7785603	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs7797724	0.81[YRI][hapmap]
rs7799600	0.82[YRI][hapmap]
rs7800200	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7805083	0.81[CEU][hapmap]
rs851651	0.80[CEU][hapmap];1.00[CHB][hapmap];0.84[EUR][1000 genomes]
rs851652	0.90[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs851698	0.91[CEU][hapmap]
rs9640245	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933973	chr7:147438206-147549993	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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