Variant report

Variant	rs7809690
Chromosome Location	chr7:147434558-147434559
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10229178	0.91[ASN][1000 genomes]
rs10952708	0.95[ASN][1000 genomes]
rs10952713	1.00[ASN][1000 genomes]
rs11971275	1.00[ASN][1000 genomes]
rs12539452	1.00[ASN][1000 genomes]
rs2049469	0.87[ASN][1000 genomes]
rs2204416	0.84[AFR][1000 genomes]
rs2888516	0.95[ASN][1000 genomes]
rs4726890	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6953679	0.95[ASN][1000 genomes]
rs73458209	1.00[ASN][1000 genomes]
rs73458234	1.00[ASN][1000 genomes]
rs73472857	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs954112	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv275461	chr7:147427757-147436087	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147434400-147435200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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