Variant report

Variant	rs7820704
Chromosome Location	chr8:129896558-129896559
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:129883202..129885415-chr8:129894950..129896778,2	MCF-7	breast:
2	chr8:129895096..129896850-chr8:129901583..129903589,2	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1519840	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1519858	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16903647	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16903648	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16903668	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16903677	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16903682	1.00[ASN][1000 genomes]
rs2090682	0.80[AFR][1000 genomes]
rs35208579	0.81[AFR][1000 genomes]
rs35643497	1.00[ASN][1000 genomes]
rs35989243	1.00[ASN][1000 genomes]
rs59460028	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6982834	0.95[AFR][1000 genomes]
rs6994591	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7014227	1.00[EUR][1000 genomes]
rs7015615	1.00[ASN][1000 genomes]
rs73708224	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73708238	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73708240	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs756123	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7817073	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7821002	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7823984	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7846441	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129893000-129897000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr8:129893000-129897000	Enhancers	NHDF-Ad	bronchial
3	chr8:129893600-129896600	Enhancers	Muscle Satellite Cultured Cells	--
4	chr8:129893800-129896800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr8:129894000-129896800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr8:129894200-129897000	Enhancers	NHEK	skin
7	chr8:129894400-129897000	Enhancers	HMEC	breast
8	chr8:129894800-129896800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr8:129895800-129897000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr8:129896400-129901200	Weak transcription	NHLF	lung
11	chr8:129896400-129902400	Weak transcription	HSMM	muscle
12	chr8:129896400-129902800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr8:129896400-129902800	Weak transcription	Osteobl	bone

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