The 2.0 version of rSNPBase

Variant report

Variant rs782651
Chromosome Location chr2:55862440-55862441
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55846400-55870000 Weak transcription Aorta Aorta
2 chr2:55846600-55862800 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr2:55846600-55863400 Weak transcription Fetal Kidney kidney
4 chr2:55846600-55870000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:55846600-55870000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr2:55846800-55862600 Weak transcription NHDF-Ad bronchial
7 chr2:55846800-55863400 Weak transcription HSMMtube muscle
8 chr2:55846800-55863400 Weak transcription NHLF lung
9 chr2:55846800-55863800 Weak transcription Rectal Smooth Muscle rectum
10 chr2:55846800-55919800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:55847400-55911000 Weak transcription Placenta Amnion Placenta Amnion
12 chr2:55847600-55864200 Weak transcription Brain Germinal Matrix brain
13 chr2:55847600-55870000 Weak transcription Colonic Mucosa Colon
14 chr2:55847600-55870000 Weak transcription Psoas Muscle Psoas
15 chr2:55847600-55886600 Weak transcription Stomach Mucosa stomach
16 chr2:55847800-55863400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr2:55848000-55862600 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr2:55848000-55862800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:55848000-55872600 Weak transcription Small Intestine intestine
20 chr2:55849200-55862800 Weak transcription Left Ventricle heart
21 chr2:55849200-55863600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:55849200-55865200 Weak transcription Gastric stomach
23 chr2:55849200-55865600 Weak transcription Fetal Brain Female brain
24 chr2:55849200-55867400 Weak transcription Lung lung
25 chr2:55849200-55868200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:55849200-55868200 Weak transcription Right Ventricle heart
27 chr2:55849200-55869400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr2:55849200-55873200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr2:55849400-55862800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr2:55849400-55862800 Weak transcription Placenta Placenta
31 chr2:55849400-55863400 Weak transcription Fetal Muscle Leg muscle
32 chr2:55849400-55867400 Weak transcription Thymus Thymus
33 chr2:55849600-55862800 Weak transcription Fetal Lung lung
34 chr2:55849800-55863400 Weak transcription HepG2 liver
35 chr2:55849800-55863800 Weak transcription Esophagus oesophagus
36 chr2:55849800-55869400 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr2:55849800-55882800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr2:55851200-55862800 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr2:55851200-55863800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr2:55851400-55862600 Weak transcription Adipose Nuclei Adipose
41 chr2:55851400-55870000 Weak transcription Spleen Spleen
42 chr2:55852000-55865800 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr2:55852000-55872400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr2:55853000-55863400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr2:55853200-55862800 Weak transcription NHEK skin
46 chr2:55853200-55864000 Weak transcription Brain Cingulate Gyrus brain
47 chr2:55853400-55863800 Weak transcription Brain Anterior Caudate brain
48 chr2:55853600-55863400 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr2:55853600-55882400 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr2:55856400-55863600 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015