Variant report

Variant	rs78289160
Chromosome Location	chr18:24792420-24792421
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv909474	chr18:24683823-24832023	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv530515	chr18:24704459-24883897	Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv518698	chr18:24779601-24793163	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
4	esv3354552	chr18:24789654-24793852	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
5	esv2443116	chr18:24791159-24792709	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:24788000-24793000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr18:24791400-24793000	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr18:24791800-24793200	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr18:24792200-24794000	Weak transcription	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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