Variant report

Variant	rs7830564
Chromosome Location	chr8:125991171-125991172
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:125486049..125488000-chr8:125990938..125993024,2	MCF-7	breast:
2	chr8:125989243..125991340-chr8:126007563..126010410,2	MCF-7	breast:
3	chr8:125987736..125990317-chr8:125991147..125995014,5	K562	blood:
4	chr8:125989560..125991489-chr8:125999508..126002227,2	K562	blood:
5	chr8:125985948..125987656-chr8:125989770..125992616,2	K562	blood:

Variant related genes	Relation type
ENSG00000245149	Chromatin interaction
ENSG00000170881	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs2384882	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891434	chr8:125630655-126324432	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125986000-125995600	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr8:125986200-125991600	ZNF genes & repeats	Primary B cells from cord blood	blood
3	chr8:125986200-125995800	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr8:125986400-125997200	ZNF genes & repeats	Liver	Liver
5	chr8:125986400-126006000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr8:125986600-125995600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr8:125987200-125991200	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr8:125987200-125991400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
9	chr8:125987200-125992600	ZNF genes & repeats	Adipose Nuclei	Adipose
10	chr8:125987400-125991400	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
11	chr8:125987400-125991600	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
12	chr8:125987600-125991600	ZNF genes & repeats	Brain Hippocampus Middle	brain
13	chr8:125987800-125997400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
14	chr8:125988200-125995400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr8:125988400-125991400	ZNF genes & repeats	Dnd41	blood
16	chr8:125988600-125991200	ZNF genes & repeats	Fetal Lung	lung
17	chr8:125988600-125991400	ZNF genes & repeats	Brain Substantia Nigra	brain
18	chr8:125988600-125991600	ZNF genes & repeats	Brain Angular Gyrus	brain
19	chr8:125988600-125994600	ZNF genes & repeats	Fetal Muscle Leg	muscle
20	chr8:125988800-125991400	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
21	chr8:125988800-125991600	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
22	chr8:125989000-125991200	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
23	chr8:125989000-125991600	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr8:125990000-125992200	Weak transcription	Aorta	Aorta
25	chr8:125990400-125991600	ZNF genes & repeats	Primary B cells from peripheral blood	blood
26	chr8:125990400-125992000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr8:125990600-125991600	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr8:125990600-125993600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr8:125990600-125996800	Weak transcription	Fetal Brain Male	brain
30	chr8:125990600-126003000	Weak transcription	HepG2	liver

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