Variant report

Variant	rs7831519
Chromosome Location	chr8:58333053-58333054
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:58332845..58333756-chr8:59307075..59308444,4	K562	blood:
2	chr8:58332657..58333329-chr8:58487609..58488171,2	MCF-7	breast:
3	chr8:58332707..58333926-chr8:58403565..58404649,11	MCF-7	breast:
4	chr8:58332821..58333771-chr8:58403706..58404764,4	MCF-7	breast:
5	chr8:58332553..58333478-chr8:59230571..59231163,3	K562	blood:

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs11990740	0.90[ASN][1000 genomes]
rs11991955	0.92[ASN][1000 genomes]
rs11994423	0.90[ASN][1000 genomes]
rs11994454	0.90[ASN][1000 genomes]
rs11994487	0.90[ASN][1000 genomes]
rs11997856	0.90[ASN][1000 genomes]
rs1317835	0.87[ASN][1000 genomes]
rs16922090	0.90[ASN][1000 genomes]
rs16922102	0.92[ASN][1000 genomes]
rs16922104	0.92[ASN][1000 genomes]
rs4738588	0.90[ASN][1000 genomes]
rs4738591	0.90[ASN][1000 genomes]
rs4738593	0.90[ASN][1000 genomes]
rs55960888	0.86[ASN][1000 genomes]
rs56121699	0.86[ASN][1000 genomes]
rs56690481	0.83[ASN][1000 genomes]
rs56832078	0.86[ASN][1000 genomes]
rs57744550	0.86[ASN][1000 genomes]
rs57829000	0.90[ASN][1000 genomes]
rs58748161	0.91[ASN][1000 genomes]
rs59643894	0.90[ASN][1000 genomes]
rs60129174	0.90[ASN][1000 genomes]
rs60999477	0.91[ASN][1000 genomes]
rs6471602	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs6980975	0.82[ASN][1000 genomes]
rs6981267	0.86[ASN][1000 genomes]
rs6981437	0.86[ASN][1000 genomes]
rs6981568	0.86[ASN][1000 genomes]
rs6982211	0.86[ASN][1000 genomes]
rs6985947	0.86[ASN][1000 genomes]
rs6986207	0.86[ASN][1000 genomes]
rs6995433	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6996802	0.86[ASN][1000 genomes]
rs6996833	0.84[ASN][1000 genomes]
rs6997730	0.86[ASN][1000 genomes]
rs7001461	0.87[ASN][1000 genomes]
rs7002746	0.86[ASN][1000 genomes]
rs7018061	0.86[ASN][1000 genomes]
rs7018443	0.86[ASN][1000 genomes]
rs72652956	0.86[ASN][1000 genomes]
rs72652957	0.86[ASN][1000 genomes]
rs72652989	0.92[ASN][1000 genomes]
rs72652991	0.92[ASN][1000 genomes]
rs72652997	0.91[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs72652998	0.91[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs72652999	0.90[ASN][1000 genomes]
rs72653000	0.91[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs72654805	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7814333	0.92[ASN][1000 genomes]
rs7826185	0.92[ASN][1000 genomes]
rs7840258	0.85[ASN][1000 genomes]
rs9694509	0.91[ASN][1000 genomes]
rs9694545	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758161	chr8:57930392-58474449	Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	esv2759618	chr8:57930392-58474449	Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv533217	chr8:57991065-58789001	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv890936	chr8:58266339-58564501	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv524390	chr8:58305969-58572471	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv518178	chr8:58328635-58542880	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58331200-58333400	Weak transcription	Liver	Liver
2	chr8:58333000-58333200	Enhancers	Primary B cells from cord blood	blood
3	chr8:58333000-58333200	Enhancers	Monocytes-CD14+_RO01746	blood

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