Variant report

Variant	rs7841162
Chromosome Location	chr8:100907795-100907796
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs1349244	0.82[EUR][1000 genomes]
rs1349245	0.82[EUR][1000 genomes]
rs1449786	0.82[EUR][1000 genomes]
rs16897656	0.82[EUR][1000 genomes]
rs16897662	0.82[EUR][1000 genomes]
rs16897666	0.82[EUR][1000 genomes]
rs16897685	0.82[EUR][1000 genomes]
rs16897701	0.82[EUR][1000 genomes]
rs16897702	0.82[EUR][1000 genomes]
rs16897708	0.82[EUR][1000 genomes]
rs16897713	0.82[EUR][1000 genomes]
rs16897726	0.82[EUR][1000 genomes]
rs16897728	0.82[EUR][1000 genomes]
rs17331148	0.82[EUR][1000 genomes]
rs1979115	0.82[EUR][1000 genomes]
rs1979117	0.82[EUR][1000 genomes]
rs2122341	0.82[EUR][1000 genomes]
rs2167101	0.82[EUR][1000 genomes]
rs28372694	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4342557	0.82[EUR][1000 genomes]
rs4734435	0.82[EUR][1000 genomes]
rs4734436	0.82[EUR][1000 genomes]
rs4734437	0.82[EUR][1000 genomes]
rs4734438	0.82[EUR][1000 genomes]
rs4734439	0.82[EUR][1000 genomes]
rs4735632	0.82[EUR][1000 genomes]
rs4735634	0.82[EUR][1000 genomes]
rs4735635	0.82[EUR][1000 genomes]
rs4735636	0.82[EUR][1000 genomes]
rs4735637	0.82[EUR][1000 genomes]
rs4735638	0.82[EUR][1000 genomes]
rs4735644	0.82[EUR][1000 genomes]
rs4735645	0.82[EUR][1000 genomes]
rs4735646	0.82[EUR][1000 genomes]
rs57753543	0.82[EUR][1000 genomes]
rs61753724	0.82[EUR][1000 genomes]
rs7003135	0.85[EUR][1000 genomes]
rs73271394	0.82[EUR][1000 genomes]
rs73273207	0.85[EUR][1000 genomes]
rs7833870	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033944	chr8:100737321-100916345	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	esv1830910	chr8:100791156-101114794	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:100906400-100910200	Weak transcription	Right Atrium	heart
2	chr8:100906600-100911800	Weak transcription	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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