The 2.0 version of rSNPBase

Variant report

Variant rs784375
Chromosome Location chr1:211542290-211542291
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211509800-211544200 Weak transcription HUVEC blood vessel
2 chr1:211510600-211555400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:211514800-211552200 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr1:211515000-211555000 Weak transcription Hela-S3 cervix
5 chr1:211515000-211555800 Weak transcription Esophagus oesophagus
6 chr1:211515200-211543200 Weak transcription Colonic Mucosa Colon
7 chr1:211515400-211548400 Weak transcription Stomach Mucosa stomach
8 chr1:211519400-211549000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr1:211519800-211544800 Weak transcription Fetal Kidney kidney
10 chr1:211519800-211547400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr1:211519800-211548600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:211521200-211550200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:211521600-211555200 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:211523600-211542800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:211525000-211555600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:211525400-211550200 Weak transcription NHDF-Ad bronchial
17 chr1:211525400-211555000 Weak transcription Fetal Lung lung
18 chr1:211525600-211548200 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr1:211525600-211550200 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:211526400-211546400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:211526600-211555400 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:211526800-211550800 Weak transcription Small Intestine intestine
23 chr1:211527400-211550400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:211528000-211551400 Strong transcription Primary B cells from peripheral blood blood
25 chr1:211528200-211550600 Strong transcription Primary T regulatory cells fromperipheralblood blood
26 chr1:211528400-211547600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:211528800-211554600 Weak transcription Psoas Muscle Psoas
28 chr1:211529400-211550400 Strong transcription Fetal Thymus thymus
29 chr1:211529600-211551200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:211530200-211555800 Weak transcription Pancreas Pancrea
31 chr1:211530400-211545600 Weak transcription Lung lung
32 chr1:211530400-211555200 Weak transcription Brain Anterior Caudate brain
33 chr1:211530600-211548800 Weak transcription Fetal Intestine Small intestine
34 chr1:211530600-211550000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr1:211530600-211555600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:211530800-211545400 Weak transcription Fetal Intestine Large intestine
37 chr1:211531000-211551600 Weak transcription NHLF lung
38 chr1:211531200-211550000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:211531200-211550000 Weak transcription HSMM muscle
40 chr1:211532400-211543200 Weak transcription Liver Liver
41 chr1:211533400-211543000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:211533400-211543000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:211533400-211545000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr1:211533400-211547200 Weak transcription Spleen Spleen
45 chr1:211533400-211550200 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr1:211533400-211551200 Strong transcription Primary T cells fromperipheralblood blood
47 chr1:211533400-211552000 Weak transcription Muscle Satellite Cultured Cells --
48 chr1:211533800-211554800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr1:211534600-211544400 Weak transcription NH-A brain
50 chr1:211534600-211545400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015