Variant report

Variant rs7857873
Chromosome Location chr9:546432-546433
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:535400-546600 Weak transcription Fetal Intestine Small intestine
2 chr9:535400-549200 Weak transcription Lung lung
3 chr9:535600-546600 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr9:535800-546600 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr9:538400-547600 Weak transcription Psoas Muscle Psoas
6 chr9:540600-549200 Weak transcription Fetal Intestine Large intestine
7 chr9:543600-546800 Enhancers Brain Anterior Caudate brain
8 chr9:543800-546800 Enhancers Brain Substantia Nigra brain
9 chr9:544200-546800 Enhancers Brain Cingulate Gyrus brain
10 chr9:544400-546800 Enhancers Cortex derived primary cultured neurospheres brain
11 chr9:544400-548400 Enhancers Brain Angular Gyrus brain
12 chr9:544600-546600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
13 chr9:544600-546600 Enhancers Right Ventricle heart
14 chr9:544600-546800 Enhancers Fetal Lung lung
15 chr9:544600-546800 Enhancers Right Atrium heart
16 chr9:544600-547200 Enhancers Left Ventricle heart
17 chr9:544600-547600 Enhancers Aorta Aorta
18 chr9:545000-546600 Enhancers Brain Inferior Temporal Lobe brain
19 chr9:545000-546600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
20 chr9:545000-547800 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr9:545200-546800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr9:545200-547600 Enhancers Adipose Nuclei Adipose
23 chr9:545400-546800 Enhancers Stomach Smooth Muscle stomach
24 chr9:545400-547000 Enhancers Ovary ovary
25 chr9:545400-547200 Enhancers Colon Smooth Muscle Colon
26 chr9:545400-547600 Enhancers Rectal Smooth Muscle rectum
27 chr9:545600-547200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr9:545600-547200 Enhancers NHEK skin
29 chr9:545800-547000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr9:546000-546600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
31 chr9:546000-546600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
32 chr9:546000-546600 Enhancers Duodenum Smooth Muscle Duodenum
33 chr9:546000-546800 Enhancers Duodenum Mucosa Duodenum
34 chr9:546000-547200 Enhancers Fetal Adrenal Gland Adrenal Gland
35 chr9:546000-547400 Enhancers HMEC breast
36 chr9:546200-546600 Enhancers Esophagus oesophagus
37 chr9:546200-546800 Enhancers HUES6 Cell Line embryonic stem cell
38 chr9:546200-546800 Enhancers Fetal Kidney kidney
39 chr9:546200-546800 Weak transcription Fetal Muscle Trunk muscle
40 chr9:546200-546800 Enhancers Fetal Muscle Leg muscle
41 chr9:546200-546800 Enhancers Skeletal Muscle Female skeletal muscle
42 chr9:546200-547000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr9:546200-547800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr9:546200-548400 Flanking Active TSS Fetal Heart heart
45 chr9:546400-546600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr9:546400-546600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr9:546400-546800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
48 chr9:546400-546800 Enhancers HUES64 Cell Line embryonic stem cell
49 chr9:546400-546800 Enhancers Rectal Mucosa Donor 29 rectum
50 chr9:546400-546800 Enhancers Skeletal Muscle Male skeletal muscle

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