Variant report

Variant rs7861607
Chromosome Location chr9:549138-549139
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:535400-549200 Weak transcription Lung lung
2 chr9:540600-549200 Weak transcription Fetal Intestine Large intestine
3 chr9:546600-549200 Weak transcription Right Ventricle heart
4 chr9:546600-549600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr9:546600-557000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr9:546600-569400 Weak transcription Esophagus oesophagus
7 chr9:547000-549200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr9:547000-549200 Weak transcription Gastric stomach
9 chr9:547000-552000 Weak transcription Ovary ovary
10 chr9:547200-549200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr9:547200-549200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr9:547200-549200 Weak transcription Fetal Muscle Trunk muscle
13 chr9:547200-549200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr9:547200-549200 Weak transcription NHEK skin
15 chr9:547200-549400 Weak transcription Colonic Mucosa Colon
16 chr9:547200-549400 Weak transcription Stomach Mucosa stomach
17 chr9:547200-551000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr9:547200-552200 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr9:547200-557800 Weak transcription Placenta Placenta
20 chr9:547400-549200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr9:547400-549200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr9:547400-549200 Weak transcription Duodenum Mucosa Duodenum
23 chr9:547400-549200 Weak transcription Fetal Intestine Small intestine
24 chr9:547400-549200 Weak transcription Pancreas Pancrea
25 chr9:547400-549200 Weak transcription Stomach Smooth Muscle stomach
26 chr9:547400-549200 Weak transcription HMEC breast
27 chr9:547400-549600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr9:547400-551200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr9:547400-557600 Weak transcription H1 Cell Line embryonic stem cell
30 chr9:547600-550600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr9:547600-552600 Weak transcription Adipose Nuclei Adipose
32 chr9:547600-555000 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr9:547600-557600 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr9:547600-571200 Weak transcription Aorta Aorta
35 chr9:547800-549200 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr9:547800-549200 Weak transcription Fetal Stomach stomach
37 chr9:547800-549200 Weak transcription Left Ventricle heart
38 chr9:547800-549600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr9:547800-552000 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr9:547800-556400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr9:547800-556800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr9:547800-563000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr9:548000-549200 Weak transcription Brain Hippocampus Middle brain
44 chr9:548000-549200 Weak transcription Brain Inferior Temporal Lobe brain
45 chr9:548000-549200 Weak transcription A549 lung
46 chr9:548200-549200 Weak transcription Brain Cingulate Gyrus brain
47 chr9:548200-551200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr9:548200-552000 Weak transcription Brain Substantia Nigra brain
49 chr9:548200-560400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr9:548400-549200 Weak transcription Brain Angular Gyrus brain

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