Variant report

Variant	rs7870358
Chromosome Location	chr9:70968950-70968951
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs196724	1.00[AMR][1000 genomes]
rs2492263	1.00[AMR][1000 genomes]
rs263787	1.00[AMR][1000 genomes]
rs263788	1.00[AMR][1000 genomes]
rs263790	1.00[AMR][1000 genomes]
rs263791	1.00[AMR][1000 genomes]
rs263792	1.00[AMR][1000 genomes]
rs263800	1.00[AMR][1000 genomes]
rs265098	1.00[AMR][1000 genomes]
rs374472	1.00[AMR][1000 genomes]
rs402654	1.00[AMR][1000 genomes]
rs409014	1.00[AMR][1000 genomes]
rs432347	1.00[AMR][1000 genomes]
rs454791	1.00[AMR][1000 genomes]
rs583999	1.00[AMR][1000 genomes]
rs694864	1.00[AMR][1000 genomes]
rs7870459	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9410574	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9410869	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427847	chr9:70318730-71153527	Weak transcription Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:70966800-70970800	Weak transcription	Fetal Lung	lung
2	chr9:70967000-70970400	Weak transcription	Fetal Heart	heart
3	chr9:70967000-70971000	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr9:70968000-70971000	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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