Variant report

Variant	rs7900073
Chromosome Location	chr10:44098127-44098128
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ZNF485	TF binding region
ENSG00000198298	Chromatin interaction
ENSG00000196793	Chromatin interaction
ENSG00000232004	Chromatin interaction

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11238596	1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs11238597	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12246417	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12263722	0.81[YRI][hapmap]
rs12269340	0.80[AFR][1000 genomes]
rs17154006	0.82[YRI][hapmap]
rs17154012	0.82[YRI][hapmap]
rs17154020	0.81[YRI][hapmap]
rs59017094	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61563250	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7069438	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7096121	1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73260732	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7906484	0.82[YRI][hapmap]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44091400-44101400	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr10:44091800-44101200	Weak transcription	Stomach Smooth Muscle	stomach
3	chr10:44092200-44101400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr10:44093000-44101600	Weak transcription	Primary T cells from cord blood	blood
5	chr10:44095000-44101400	Weak transcription	Spleen	Spleen

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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