Variant report

Variant	rs7933734
Chromosome Location	chr11:72722441-72722442
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs7939736	1.00[MEX][hapmap]
rs7940683	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422418	chr11:72646518-72807865	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv555411	chr11:72647296-72800970	Flanking Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:72687600-72724200	Weak transcription	HMEC	breast
2	chr11:72696000-72724000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr11:72701000-72727200	Weak transcription	HUVEC	blood vessel
4	chr11:72711200-72723000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr11:72715000-72723000	ZNF genes & repeats	GM12878-XiMat	blood
6	chr11:72716200-72731200	Weak transcription	Fetal Kidney	kidney
7	chr11:72719600-72723400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
8	chr11:72719600-72724400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr11:72719800-72722600	ZNF genes & repeats	Primary B cells from peripheral blood	blood
10	chr11:72720000-72731200	Weak transcription	Small Intestine	intestine
11	chr11:72720400-72722600	ZNF genes & repeats	Adipose Nuclei	Adipose
12	chr11:72720400-72723000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr11:72720600-72722600	ZNF genes & repeats	A549	lung
14	chr11:72720600-72722600	ZNF genes & repeats	Dnd41	blood
15	chr11:72720600-72723000	ZNF genes & repeats	Primary B cells from cord blood	blood
16	chr11:72720600-72723000	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr11:72720600-72723200	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
18	chr11:72720800-72722600	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr11:72720800-72722600	ZNF genes & repeats	Liver	Liver
20	chr11:72720800-72722800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
21	chr11:72721000-72722600	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
22	chr11:72721000-72723000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr11:72721200-72723000	Strong transcription	HepG2	liver
24	chr11:72721400-72722600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr11:72721400-72722600	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
26	chr11:72721400-72722600	Strong transcription	Fetal Lung	lung
27	chr11:72721400-72722600	ZNF genes & repeats	Fetal Muscle Trunk	muscle
28	chr11:72721400-72722800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
29	chr11:72721400-72722800	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
30	chr11:72721400-72722800	ZNF genes & repeats	Fetal Muscle Leg	muscle
31	chr11:72721600-72722600	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr11:72721600-72722600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr11:72721600-72722600	ZNF genes & repeats	Aorta	Aorta
34	chr11:72721600-72722600	ZNF genes & repeats	Brain Germinal Matrix	brain
35	chr11:72721600-72722600	ZNF genes & repeats	Brain Hippocampus Middle	brain
36	chr11:72721600-72722600	ZNF genes & repeats	Fetal Brain Female	brain
37	chr11:72721600-72722600	ZNF genes & repeats	Left Ventricle	heart
38	chr11:72721600-72722600	ZNF genes & repeats	Lung	lung
39	chr11:72721600-72722600	Strong transcription	Rectal Mucosa Donor 29	rectum
40	chr11:72721600-72722600	ZNF genes & repeats	Rectal Smooth Muscle	rectum
41	chr11:72721600-72722600	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
42	chr11:72721600-72722800	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr11:72721600-72722800	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr11:72721600-72722800	ZNF genes & repeats	Primary mononuclear cells fromperipheralblood	Blood
45	chr11:72721600-72722800	ZNF genes & repeats	Fetal Intestine Large	intestine
46	chr11:72721600-72722800	ZNF genes & repeats	Fetal Stomach	stomach
47	chr11:72721600-72722800	ZNF genes & repeats	Fetal Thymus	thymus
48	chr11:72721600-72722800	Strong transcription	Skeletal Muscle Female	skeletal muscle
49	chr11:72721600-72722800	ZNF genes & repeats	Thymus	Thymus
50	chr11:72721600-72722800	ZNF genes & repeats	Spleen	Spleen

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