Variant report

Variant rs7945558
Chromosome Location chr11:46957808-46957809
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46944800-46958200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr11:46957000-46958000 Enhancers Fetal Intestine Small intestine
3 chr11:46957200-46958000 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr11:46957600-46958000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
5 chr11:46957600-46958000 Enhancers Primary B cells from peripheral blood blood
6 chr11:46957600-46958000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr11:46957600-46958000 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr11:46957600-46958000 Flanking Active TSS Duodenum Mucosa Duodenum
9 chr11:46957600-46958000 Enhancers Fetal Muscle Trunk muscle
10 chr11:46957600-46958000 Enhancers Placenta Placenta
11 chr11:46957600-46958000 Enhancers Left Ventricle heart
12 chr11:46957600-46958000 Enhancers Lung lung
13 chr11:46957600-46958000 Enhancers Ovary ovary
14 chr11:46957600-46958000 Enhancers Pancreas Pancrea
15 chr11:46957600-46958000 Enhancers Psoas Muscle Psoas
16 chr11:46957600-46958800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
17 chr11:46957600-46959200 Active TSS Brain Inferior Temporal Lobe brain
18 chr11:46957800-46958000 Enhancers HUES6 Cell Line embryonic stem cell
19 chr11:46957800-46958000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr11:46957800-46958000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr11:46957800-46958000 Flanking Active TSS Primary hematopoietic stem cells blood
22 chr11:46957800-46958000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
23 chr11:46957800-46958000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr11:46957800-46958000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
25 chr11:46957800-46958000 Flanking Active TSS Brain Anterior Caudate brain
26 chr11:46957800-46958000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
27 chr11:46957800-46958000 Flanking Active TSS Brain Substantia Nigra brain
28 chr11:46957800-46958000 Enhancers Fetal Brain Male brain
29 chr11:46957800-46958000 Enhancers Fetal Heart heart
30 chr11:46957800-46958000 Enhancers Fetal Muscle Leg muscle
31 chr11:46957800-46958000 Enhancers Fetal Stomach stomach
32 chr11:46957800-46958000 Enhancers Thymus Thymus
33 chr11:46957800-46958000 Flanking Active TSS A549 lung
34 chr11:46957800-46958000 Flanking Active TSS HepG2 liver
35 chr11:46957800-46958000 Flanking Active TSS K562 blood
36 chr11:46957800-46958000 Enhancers Monocytes-CD14+_RO01746 blood
37 chr11:46957800-46958000 Flanking Active TSS NHDF-Ad bronchial
38 chr11:46957800-46958200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
39 chr11:46957800-46958200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
40 chr11:46957800-46958200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr11:46957800-46958200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr11:46957800-46958200 Enhancers Primary monocytes fromperipheralblood blood
43 chr11:46957800-46958200 Flanking Active TSS Primary B cells from cord blood blood
44 chr11:46957800-46958200 Flanking Active TSS Primary T cells from cord blood blood
45 chr11:46957800-46958200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
46 chr11:46957800-46958200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
47 chr11:46957800-46958200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
48 chr11:46957800-46958200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
49 chr11:46957800-46958200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
50 chr11:46957800-46958200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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