Variant report

Variant	rs7946010
Chromosome Location	chr11:17176057-17176058
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:17168815..17170392-chr11:17175190..17177011,2	K562	blood:
2	chr11:17167469..17170392-chr11:17173847..17176690,3	K562	blood:

Extended variants
information (count: 130 )
Associated
traits (count: 15 )

rSNPs within LD-proxies of this variant (count:125)

rs_ID	r²[population]
rs10741724	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10766381	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10832733	0.94[ASW][hapmap];1.00[CEU][hapmap];0.91[CHB][hapmap];0.96[CHD][hapmap];0.80[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];0.95[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.84[YRI][hapmap];0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10832734	0.82[AMR][1000 genomes]
rs10832735	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10832736	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10832739	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10832743	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10832745	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10832746	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10832747	0.91[CEU][hapmap];0.92[JPT][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10832748	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10832752	0.86[JPT][hapmap]
rs11024143	0.86[EUR][1000 genomes]
rs11024148	0.94[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];0.95[MEX][hapmap];0.96[MKK][hapmap];0.89[TSI][hapmap];0.84[YRI][hapmap];0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11024158	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.98[TSI][hapmap];0.91[YRI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11024159	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11024163	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11024204	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];0.95[MEX][hapmap];0.91[MKK][hapmap];0.93[TSI][hapmap];0.84[YRI][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11024207	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11024208	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11024223	0.91[CHD][hapmap];0.86[JPT][hapmap]
rs11024227	0.81[EUR][1000 genomes]
rs1125737	0.89[EUR][1000 genomes]
rs11821773	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12280930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12286505	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1236309	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1236310	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12804000	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1685932	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1979603	0.88[EUR][1000 genomes]
rs1989405	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2008905	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2052188	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs214075	0.83[CHD][hapmap]
rs214076	0.83[CHD][hapmap]
rs214082	0.82[CHB][hapmap];0.87[CHD][hapmap];0.92[JPT][hapmap]
rs214083	0.82[CHB][hapmap];0.92[JPT][hapmap]
rs214092	0.81[CHB][hapmap];0.87[CHD][hapmap];0.92[JPT][hapmap]
rs214093	0.82[CHB][hapmap];0.92[JPT][hapmap]
rs214097	0.82[CHB][hapmap];0.87[CHD][hapmap];0.92[JPT][hapmap]
rs214101	0.91[CHD][hapmap]
rs214900	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.94[MKK][hapmap];0.96[TSI][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs214901	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.95[MEX][hapmap];0.96[MKK][hapmap];0.96[TSI][hapmap];0.84[YRI][hapmap];0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs214904	0.85[ASN][1000 genomes]
rs214906	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs214909	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214910	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.95[MEX][hapmap];0.91[MKK][hapmap];0.93[TSI][hapmap];0.81[YRI][hapmap];0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214911	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs214912	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs214913	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs214914	0.95[CEU][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214915	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214916	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214917	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs214918	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214919	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214920	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214921	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214922	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs214925	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.95[MEX][hapmap];0.91[MKK][hapmap];0.91[TSI][hapmap];0.81[YRI][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs214926	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs214927	0.96[CEU][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs214933	0.92[CHB][hapmap];1.00[CHD][hapmap];0.87[ASN][1000 genomes]
rs214935	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs214936	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.81[YRI][hapmap];0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs214937	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs214939	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs214940	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];0.81[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2171615	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34591697	0.80[EUR][1000 genomes]
rs35933265	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4356203	0.92[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];0.85[JPT][hapmap];0.83[TSI][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4509731	0.86[EUR][1000 genomes]
rs511119	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs512852	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs527810	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs536628	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs542274	0.91[ASN][1000 genomes]
rs545773	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs550667	1.00[CEU][hapmap];0.81[YRI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs553711	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs567033	0.86[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs577207	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs589319	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59192183	0.83[EUR][1000 genomes]
rs594034	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs598946	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs603618	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61357262	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs615358	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs618331	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs620241	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs621246	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs635802	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6486352	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6486354	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs651513	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs656623	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs662711	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs664382	0.85[ASN][1000 genomes]
rs667984	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs677042	0.82[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs677540	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.84[YRI][hapmap];0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs680205	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7101686	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7106705	0.87[EUR][1000 genomes]
rs7107283	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7118006	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7118443	0.83[EUR][1000 genomes]
rs7123301	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.84[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7125607	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7342262	0.96[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap];0.88[EUR][1000 genomes]
rs7396382	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7396958	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7478986	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs7925692	0.88[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];0.96[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.90[MKK][hapmap];0.85[TSI][hapmap];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7927240	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs7932916	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7935219	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7937176	0.96[CEU][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7938820	0.94[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];0.95[MEX][hapmap];0.95[MKK][hapmap];0.89[TSI][hapmap]
rs7940418	0.87[EUR][1000 genomes]
rs7949699	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467711	chr11:17027555-17320797	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv553568	chr11:17027555-17320797	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv7691	chr11:17151593-17196894	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv469762	chr11:17170690-17320691	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
5	nsv482905	chr11:17170690-17320691	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

mRNA abundance (count:15)

SNP	Gene	Cis/trans	Tissue	Source
rs7946010	NUCB2	cis	Lymphoblastoid	GTEx
rs7946010	NUCB2	cis	cerebellum	SCAN
rs7946010	SPTY2D1	cis	parietal	SCAN
rs7946010	OR7E14P	cis	Nerve Tibial	GTEx
rs7946010	NCR3LG1	cis	Esophagus Mucosa	GTEx
rs7946010	NUCB2	cis	multi-tissue	Pritchard
rs7946010	NUCB2	cis	lymphoblastoid	seeQTL
rs7946010	PDE3B	cis	parietal	SCAN
rs7946010	KCNJ11	cis	Esophagus Mucosa	GTEx
rs7946010	C7orf72	trans	cerebellum	SCAN
rs7946010	NUCB2	Cis_1M	lymphoblastoid	RTeQTL
rs7946010	SAA4	cis	parietal	SCAN
rs7946010	GTF2H1	cis	cerebellum	SCAN
rs7946010	SERGEF	cis	parietal	SCAN
rs7946010	OR7E14P	cis	Esophagus Mucosa	GTEx

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17108200-17177400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:17111600-17182000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr11:17120400-17181600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr11:17121000-17178000	Weak transcription	Psoas Muscle	Psoas
5	chr11:17125800-17181400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr11:17126800-17186400	Weak transcription	Colonic Mucosa	Colon
7	chr11:17130200-17203800	Weak transcription	Aorta	Aorta
8	chr11:17140000-17183400	Weak transcription	Small Intestine	intestine
9	chr11:17144200-17192800	Weak transcription	NHDF-Ad	bronchial
10	chr11:17150800-17186000	Weak transcription	NHLF	lung
11	chr11:17156400-17186400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr11:17156400-17186600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr11:17156600-17180800	Weak transcription	Colon Smooth Muscle	Colon
14	chr11:17156600-17182400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chr11:17156600-17183600	Weak transcription	Lung	lung
16	chr11:17156600-17219200	Weak transcription	HSMMtube	muscle
17	chr11:17156800-17181000	Weak transcription	Brain Germinal Matrix	brain
18	chr11:17158000-17215600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr11:17164400-17181200	Weak transcription	Gastric	stomach
20	chr11:17164400-17186200	Weak transcription	A549	lung
21	chr11:17165200-17180600	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr11:17165200-17215200	Weak transcription	Rectal Smooth Muscle	rectum
23	chr11:17166200-17190200	Weak transcription	NH-A	brain
24	chr11:17166400-17183600	Weak transcription	Fetal Intestine Small	intestine
25	chr11:17167000-17183800	Weak transcription	Fetal Muscle Leg	muscle
26	chr11:17167000-17184000	Weak transcription	Pancreas	Pancrea
27	chr11:17167000-17186000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr11:17167000-17188600	Weak transcription	Fetal Stomach	stomach
29	chr11:17167000-17188800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr11:17167200-17178000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
31	chr11:17167400-17178600	Weak transcription	Fetal Kidney	kidney
32	chr11:17167400-17181800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
33	chr11:17167400-17183000	Weak transcription	Dnd41	blood
34	chr11:17167400-17183400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
35	chr11:17167400-17185000	Weak transcription	Ovary	ovary
36	chr11:17167400-17186800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr11:17167400-17190200	Weak transcription	Fetal Muscle Trunk	muscle
38	chr11:17167400-17190400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
39	chr11:17167400-17204400	Weak transcription	Thymus	Thymus
40	chr11:17167400-17212600	Weak transcription	Stomach Smooth Muscle	stomach
41	chr11:17167400-17228000	Weak transcription	Fetal Thymus	thymus
42	chr11:17167600-17176200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
43	chr11:17167600-17176200	Weak transcription	Fetal Lung	lung
44	chr11:17167600-17177200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr11:17167600-17181400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr11:17167600-17182200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
47	chr11:17167600-17186400	Weak transcription	HMEC	breast
48	chr11:17168000-17180600	Weak transcription	Skeletal Muscle Male	skeletal muscle
49	chr11:17168000-17190200	Weak transcription	H1 Cell Line	embryonic stem cell
50	chr11:17168200-17183600	Weak transcription	Left Ventricle	heart

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