Variant report

Variant	rs7946933
Chromosome Location	chr11:75977764-75977765
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:75946538..75948469-chr11:75977431..75980028,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs12575530	0.85[EUR][1000 genomes]
rs17134731	0.82[AFR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049039	chr11:75827548-76023665	Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
2	nsv897926	chr11:75862571-76004202	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
3	nsv1040118	chr11:75870189-75995089	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
4	nsv1053129	chr11:75871240-75997663	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
5	nsv897930	chr11:75960472-76027936	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	esv3431387	chr11:75977704-75981402	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:75962600-75983600	Weak transcription	Spleen	Spleen
2	chr11:75975000-75979600	Weak transcription	Lung	lung
3	chr11:75975600-75979200	Enhancers	Fetal Muscle Leg	muscle
4	chr11:75975800-75978400	Enhancers	Placenta	Placenta
5	chr11:75976000-75978200	Enhancers	Right Atrium	heart
6	chr11:75976000-75982600	Enhancers	Adipose Nuclei	Adipose
7	chr11:75976200-75977800	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr11:75976200-75978200	Enhancers	Placenta Amnion	Placenta Amnion
9	chr11:75976200-75978600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr11:75976200-75978600	Flanking Active TSS	Hela-S3	cervix
11	chr11:75976200-75979000	Enhancers	Skeletal Muscle Male	skeletal muscle
12	chr11:75976200-75979600	Enhancers	Fetal Lung	lung
13	chr11:75976400-75978200	Enhancers	HMEC	breast
14	chr11:75976400-75978800	Enhancers	Fetal Stomach	stomach
15	chr11:75976600-75978200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr11:75976600-75978200	Enhancers	HSMMtube	muscle
17	chr11:75976600-75978200	Enhancers	NHEK	skin
18	chr11:75976600-75978400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr11:75976600-75978400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr11:75976600-75979200	Enhancers	Osteobl	bone
21	chr11:75976800-75978000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr11:75976800-75978600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr11:75977000-75978000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr11:75977000-75978000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr11:75977000-75978000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
26	chr11:75977000-75978000	Enhancers	A549	lung
27	chr11:75977000-75978200	Enhancers	NH-A	brain
28	chr11:75977000-75978600	Enhancers	HSMM	muscle
29	chr11:75977200-75978000	Enhancers	Colon Smooth Muscle	Colon
30	chr11:75977200-75978000	Enhancers	NHDF-Ad	bronchial
31	chr11:75977200-75978200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr11:75977200-75978600	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr11:75977200-75979600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr11:75977400-75978200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr11:75977600-75977800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
36	chr11:75977600-75978000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr11:75977600-75978000	Enhancers	Left Ventricle	heart

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