Variant report

Variant	rs7972959
Chromosome Location	chr12:11715721-11715722
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10491980	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11054355	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12296206	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12297330	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12304175	1.00[JPT][hapmap]
rs12306671	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12312814	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12318942	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1641623	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16934780	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16934824	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16935059	0.94[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16935084	0.94[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1795551	1.00[JPT][hapmap]
rs56717408	0.94[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7316082	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73286612	0.94[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7975230	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7975331	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11713600-11716200	Enhancers	GM12878-XiMat	blood
2	chr12:11714200-11718200	Weak transcription	Aorta	Aorta
3	chr12:11714800-11716000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr12:11715200-11721800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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