Variant report
| Variant | rs7989952 |
|---|---|
| Chromosome Location | chr13:96466184-96466185 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:96444400-96477600 | Weak transcription | Brain Angular Gyrus | brain |
| 2 | chr13:96444400-96477600 | Weak transcription | NHLF | lung |
| 3 | chr13:96444400-96485600 | Weak transcription | NHDF-Ad | bronchial |
| 4 | chr13:96445600-96477400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 5 | chr13:96445800-96490000 | Weak transcription | HepG2 | liver |
| 6 | chr13:96446200-96477400 | Weak transcription | Gastric | stomach |
| 7 | chr13:96446800-96477400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 8 | chr13:96446800-96477400 | Weak transcription | HSMMtube | muscle |
| 9 | chr13:96447200-96477400 | Weak transcription | Osteobl | bone |
| 10 | chr13:96452000-96490600 | Weak transcription | Fetal Kidney | kidney |
| 11 | chr13:96455000-96467800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 12 | chr13:96458800-96477400 | Weak transcription | NH-A | brain |
| 13 | chr13:96460400-96477200 | Weak transcription | A549 | lung |
| 14 | chr13:96460400-96477400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 15 | chr13:96462000-96468000 | Weak transcription | Pancreas | Pancrea |
| 16 | chr13:96462000-96477400 | Weak transcription | HSMM | muscle |
| 17 | chr13:96462200-96477200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 18 | chr13:96462200-96477400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 19 | chr13:96462600-96467800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 20 | chr13:96462600-96485600 | Weak transcription | Hela-S3 | cervix |
| 21 | chr13:96462800-96466600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 22 | chr13:96464800-96466200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 23 | chr13:96464800-96466600 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr13:96464800-96466600 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 25 | chr13:96464800-96466600 | ZNF genes & repeats | Aorta | Aorta |
| 26 | chr13:96464800-96466800 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
| 27 | chr13:96465000-96466600 | ZNF genes & repeats | GM12878-XiMat | blood |
| 28 | chr13:96465000-96466800 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
| 29 | chr13:96465000-96466800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 30 | chr13:96465000-96466800 | ZNF genes & repeats | Fetal Brain Female | brain |
| 31 | chr13:96465000-96466800 | ZNF genes & repeats | Ovary | ovary |
| 32 | chr13:96465000-96468800 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 33 | chr13:96465200-96466800 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
| 34 | chr13:96465400-96466200 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 35 | chr13:96465400-96466600 | ZNF genes & repeats | Fetal Lung | lung |
| 36 | chr13:96465400-96466600 | Strong transcription | Stomach Smooth Muscle | stomach |
| 37 | chr13:96465400-96466800 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr13:96465400-96466800 | ZNF genes & repeats | Brain Cingulate Gyrus | brain |
| 39 | chr13:96465400-96466800 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 40 | chr13:96465600-96466200 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
| 41 | chr13:96465600-96466200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 42 | chr13:96465600-96466600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
| 43 | chr13:96465600-96466800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
| 44 | chr13:96465600-96481200 | Weak transcription | Psoas Muscle | Psoas |
| 45 | chr13:96465800-96466200 | ZNF genes & repeats | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 46 | chr13:96465800-96466600 | ZNF genes & repeats | Left Ventricle | heart |
| 47 | chr13:96465800-96466600 | ZNF genes & repeats | Rectal Smooth Muscle | rectum |
| 48 | chr13:96465800-96466600 | ZNF genes & repeats | Spleen | Spleen |
| 49 | chr13:96466000-96466200 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
| 50 | chr13:96466000-96466200 | ZNF genes & repeats | Fetal Intestine Large | intestine |
