The 2.0 version of rSNPBase

Variant report

Variant rs7999515
Chromosome Location chr13:51553813-51553814
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:51523600-51555200 Weak transcription HSMMtube muscle
2 chr13:51530600-51563400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr13:51535800-51563200 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr13:51539200-51565400 Weak transcription Esophagus oesophagus
5 chr13:51539600-51564600 Weak transcription Brain Angular Gyrus brain
6 chr13:51539600-51564800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr13:51539800-51555000 Weak transcription Brain Hippocampus Middle brain
8 chr13:51540600-51559000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr13:51540800-51555800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr13:51542200-51565400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr13:51544800-51563400 Weak transcription Colon Smooth Muscle Colon
12 chr13:51545400-51558000 Weak transcription Primary T cells fromperipheralblood blood
13 chr13:51546000-51554600 Weak transcription Fetal Stomach stomach
14 chr13:51548200-51556000 Weak transcription H9 Cell Line embryonic stem cell
15 chr13:51548800-51563400 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr13:51549200-51563400 Weak transcription Ovary ovary
17 chr13:51549600-51554200 Weak transcription Fetal Intestine Large intestine
18 chr13:51549600-51554400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr13:51550000-51554600 Enhancers Primary neutrophils fromperipheralblood blood
20 chr13:51550200-51554400 Weak transcription Fetal Muscle Leg muscle
21 chr13:51550600-51554000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr13:51550600-51554800 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr13:51550600-51555400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr13:51550800-51563000 Weak transcription Rectal Smooth Muscle rectum
25 chr13:51551400-51554000 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr13:51551400-51555000 Weak transcription Left Ventricle heart
27 chr13:51551400-51555400 Weak transcription Stomach Smooth Muscle stomach
28 chr13:51551400-51565400 Weak transcription Primary B cells from peripheral blood blood
29 chr13:51551600-51564000 Weak transcription Thymus Thymus
30 chr13:51551800-51563600 Weak transcription Fetal Thymus thymus
31 chr13:51552000-51556000 Weak transcription Placenta Placenta
32 chr13:51552400-51554400 Enhancers Monocytes-CD14+_RO01746 blood
33 chr13:51552400-51554600 Enhancers Primary monocytes fromperipheralblood blood
34 chr13:51553200-51554000 Enhancers HepG2 liver
35 chr13:51553400-51554000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr13:51553400-51556400 Weak transcription Liver Liver
37 chr13:51553800-51563400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015