Variant report

Variant	rs8008142
Chromosome Location	chr14:70325779-70325780
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10130124	1.00[AMR][1000 genomes]
rs10137162	1.00[AMR][1000 genomes]
rs10146486	1.00[AMR][1000 genomes]
rs28445972	1.00[AMR][1000 genomes]
rs28524787	1.00[AMR][1000 genomes]
rs28633309	1.00[AMR][1000 genomes]
rs28757382	1.00[AMR][1000 genomes]
rs28879830	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456336	chr14:70081956-70574149	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv565007	chr14:70081956-70574149	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
3	nsv832824	chr14:70320639-70511401	Enhancers Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70321400-70326200	Weak transcription	Fetal Brain Male	brain
2	chr14:70323400-70327200	Weak transcription	Placenta	Placenta
3	chr14:70325400-70325800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr14:70325400-70326000	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr14:70325600-70325800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr14:70325600-70325800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
7	chr14:70325600-70326000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr14:70325600-70326600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr14:70325600-70327600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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