Variant report

Variant	rs8010314
Chromosome Location	chr14:32865242-32865243
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1951180	1.00[CEU][hapmap];0.86[YRI][hapmap];1.00[EUR][1000 genomes]
rs1956999	1.00[EUR][1000 genomes]
rs1957003	1.00[EUR][1000 genomes]
rs2025262	1.00[EUR][1000 genomes]
rs2145589	1.00[EUR][1000 genomes]
rs2145590	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs2145592	1.00[EUR][1000 genomes]
rs7140664	1.00[EUR][1000 genomes]
rs7157707	1.00[CEU][hapmap];0.81[YRI][hapmap];1.00[EUR][1000 genomes]
rs7158034	1.00[EUR][1000 genomes]
rs8011313	1.00[EUR][1000 genomes]
rs941741	1.00[CEU][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv976820	chr14:32860301-32873799	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32849000-32867400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr14:32854200-32866600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:32860200-32865600	Weak transcription	Left Ventricle	heart
4	chr14:32860600-32865600	Weak transcription	Brain Hippocampus Middle	brain
5	chr14:32860800-32865600	Weak transcription	Brain Substantia Nigra	brain
6	chr14:32862000-32867000	Weak transcription	Brain Germinal Matrix	brain
7	chr14:32863600-32865400	Weak transcription	Brain Angular Gyrus	brain
8	chr14:32863800-32865400	Weak transcription	Brain Cingulate Gyrus	brain
9	chr14:32864000-32865400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr14:32864400-32865400	Weak transcription	Brain Anterior Caudate	brain
11	chr14:32864400-32866800	Weak transcription	Fetal Heart	heart
12	chr14:32865000-32867800	Enhancers	Brain Inferior Temporal Lobe	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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