Variant report
| Variant | rs8013528 |
|---|---|
| Chromosome Location | chr14:55714840-55714841 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:4 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr14:55710760..55712909-chr14:55714004..55716438,2 | K562 | blood: | |
| 2 | chr14:55709259..55712260-chr14:55714004..55717778,3 | K562 | blood: | |
| 3 | chr14:55714468..55716489-chr14:55876982..55879150,2 | MCF-7 | breast: | |
| 4 | chr14:55712626..55715318-chr14:55876588..55879514,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000126775 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:15)
| rs_ID | r2[population] |
|---|---|
| rs10139912 | 0.94[EUR][1000 genomes] |
| rs10483641 | 0.82[CEU][hapmap] |
| rs11845284 | 0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs17742621 | 0.91[CEU][hapmap] |
| rs17743484 | 0.81[CEU][hapmap] |
| rs1959443 | 0.81[CEU][hapmap] |
| rs2274271 | 0.81[CEU][hapmap];0.86[CHB][hapmap];0.83[JPT][hapmap] |
| rs28837432 | 0.83[ASN][1000 genomes] |
| rs41437744 | 0.81[CEU][hapmap] |
| rs713473 | 0.81[CEU][hapmap] |
| rs713475 | 0.81[CEU][hapmap] |
| rs7141706 | 0.82[EUR][1000 genomes] |
| rs7159490 | 0.81[CEU][hapmap] |
| rs8009244 | 0.80[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs8009718 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
