Variant report

Variant	rs8015078
Chromosome Location	chr14:65653765-65653766
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:65649526..65652091-chr14:65652657..65655618,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17826026	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4899168	0.95[AFR][1000 genomes]
rs55839896	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832817	chr14:65637069-65810406	Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65641600-65658200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr14:65647800-65659800	Weak transcription	Fetal Intestine Large	intestine
3	chr14:65651000-65653800	Enhancers	Fetal Heart	heart
4	chr14:65651200-65654400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr14:65651400-65654400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr14:65651400-65658200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr14:65652400-65655800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr14:65652600-65655400	Enhancers	H1 Cell Line	embryonic stem cell
9	chr14:65652800-65655400	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr14:65653200-65654200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr14:65653200-65654600	Enhancers	GM12878-XiMat	blood
12	chr14:65653400-65654000	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr14:65653400-65654200	Enhancers	H9 Cell Line	embryonic stem cell
14	chr14:65653400-65654800	Enhancers	HUES64 Cell Line	embryonic stem cell
15	chr14:65653600-65654200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr14:65653600-65654600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
17	chr14:65653600-65654600	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
18	chr14:65653600-65654600	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
19	chr14:65653600-65654800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr14:65653600-65654800	Enhancers	Primary B cells from peripheral blood	blood

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