Variant report

Variant	rs8021655
Chromosome Location	chr14:32615170-32615171
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:32614093..32616573-chr14:32619305..32621843,3	K562	blood:
2	chr14:32614081..32616307-chr14:32620214..32621864,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10134888	1.00[EUR][1000 genomes]
rs10143850	1.00[EUR][1000 genomes]
rs11849454	1.00[EUR][1000 genomes]
rs12100687	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12100688	1.00[EUR][1000 genomes]
rs12100768	1.00[EUR][1000 genomes]
rs12100930	1.00[EUR][1000 genomes]
rs12100931	1.00[EUR][1000 genomes]
rs12101226	1.00[EUR][1000 genomes]
rs17098508	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs28765407	1.00[EUR][1000 genomes]
rs28802314	1.00[EUR][1000 genomes]
rs28845852	1.00[EUR][1000 genomes]
rs57218277	1.00[EUR][1000 genomes]
rs58280109	1.00[EUR][1000 genomes]
rs59021515	1.00[EUR][1000 genomes]
rs59609395	1.00[EUR][1000 genomes]
rs7140954	1.00[EUR][1000 genomes]
rs7152059	1.00[EUR][1000 genomes]
rs7157301	1.00[EUR][1000 genomes]
rs74041589	1.00[EUR][1000 genomes]
rs74041590	1.00[EUR][1000 genomes]
rs74041597	1.00[EUR][1000 genomes]
rs74041599	1.00[EUR][1000 genomes]
rs74041600	1.00[EUR][1000 genomes]
rs8012001	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv983949	chr14:32604484-32618641	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32574400-32615600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr14:32577400-32625000	Weak transcription	Small Intestine	intestine
3	chr14:32590000-32623000	Weak transcription	HSMMtube	muscle
4	chr14:32591600-32621200	Weak transcription	NHLF	lung
5	chr14:32596000-32622800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr14:32596400-32620400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
7	chr14:32596600-32616200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr14:32597800-32616600	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr14:32597800-32619600	Weak transcription	Esophagus	oesophagus
10	chr14:32598000-32618400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr14:32598000-32629000	Weak transcription	Gastric	stomach
12	chr14:32599200-32615200	Weak transcription	Stomach Smooth Muscle	stomach
13	chr14:32599200-32619600	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr14:32599200-32623400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr14:32600400-32623000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
16	chr14:32600800-32615600	Weak transcription	Primary T helper cells PMA-I stimulated	--
17	chr14:32601600-32626800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
18	chr14:32602200-32619600	Weak transcription	K562	blood
19	chr14:32603600-32630400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
20	chr14:32603800-32615600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr14:32604000-32626200	Weak transcription	Rectal Smooth Muscle	rectum
22	chr14:32604400-32626200	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr14:32605800-32625400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
24	chr14:32606000-32615600	Weak transcription	NHDF-Ad	bronchial
25	chr14:32606400-32615400	Weak transcription	HMEC	breast
26	chr14:32606600-32616600	Weak transcription	Rectal Mucosa Donor 29	rectum
27	chr14:32606800-32615600	Weak transcription	Skeletal Muscle Female	skeletal muscle
28	chr14:32606800-32619800	Weak transcription	Brain Angular Gyrus	brain
29	chr14:32607000-32623400	Weak transcription	Psoas Muscle	Psoas
30	chr14:32607400-32615400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
31	chr14:32607600-32616200	Weak transcription	Duodenum Mucosa	Duodenum
32	chr14:32607600-32623200	Weak transcription	Monocytes-CD14+_RO01746	blood
33	chr14:32607800-32616000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
34	chr14:32607800-32616400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
35	chr14:32607800-32616800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr14:32607800-32616800	Weak transcription	Fetal Thymus	thymus
37	chr14:32607800-32617000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr14:32607800-32618400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr14:32607800-32620800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr14:32607800-32623800	Weak transcription	Colonic Mucosa	Colon
41	chr14:32607800-32625000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr14:32607800-32625600	Weak transcription	Lung	lung
43	chr14:32608000-32615400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr14:32608000-32615800	Weak transcription	Osteobl	bone
45	chr14:32608000-32616200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr14:32608200-32615200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr14:32608200-32615400	Weak transcription	Adipose Nuclei	Adipose
48	chr14:32608200-32615400	Weak transcription	Rectal Mucosa Donor 31	rectum
49	chr14:32608600-32619400	Weak transcription	HUES6 Cell Line	embryonic stem cell
50	chr14:32609400-32619400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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