Variant report

Variant	rs8037145
Chromosome Location	chr15:78613420-78613421
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:78605682..78609938-chr15:78611708..78614528,4	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11630206	0.84[ASN][1000 genomes]
rs16969725	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs3784333	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs4886568	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs62007859	0.88[ASN][1000 genomes]
rs62010360	0.88[ASN][1000 genomes]
rs62010361	0.95[EUR][1000 genomes]
rs8026332	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529491	chr15:77932659-78751516	Genic enhancers Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	nsv917303	chr15:78491050-79205255	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	122 gene(s)	inside rSNPs	diseases
3	nsv833063	chr15:78605215-78754945	Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
4	nsv1052910	chr15:78608637-78707049	Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:78601400-78616800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr15:78609400-78614200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr15:78609600-78613600	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr15:78609600-78613800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr15:78609600-78614000	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr15:78609600-78614200	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr15:78609600-78614400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr15:78609800-78613600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr15:78609800-78613800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr15:78609800-78614400	Weak transcription	Left Ventricle	heart
11	chr15:78610000-78613600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr15:78610000-78617600	Weak transcription	Fetal Intestine Large	intestine
13	chr15:78610600-78618200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr15:78611000-78618200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr15:78611200-78613800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr15:78611600-78614400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr15:78612000-78615800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
18	chr15:78612400-78613800	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr15:78612800-78615800	Enhancers	Fetal Muscle Leg	muscle
20	chr15:78612800-78616200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr15:78612800-78618600	Enhancers	Fetal Stomach	stomach
22	chr15:78613200-78614800	Enhancers	HSMMtube	muscle
23	chr15:78613200-78616800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
24	chr15:78613400-78615400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr15:78613400-78615400	Enhancers	Placenta	Placenta
26	chr15:78613400-78615600	Enhancers	HUES6 Cell Line	embryonic stem cell
27	chr15:78613400-78615800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr15:78613400-78617000	Enhancers	H1 Cell Line	embryonic stem cell
29	chr15:78613400-78618200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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