Variant report

Variant	rs8086995
Chromosome Location	chr18:30381522-30381523
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12232690	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1523576	0.96[CEU][hapmap];0.85[CHB][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17738786	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17851892	0.83[AMR][1000 genomes]
rs62092151	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7232060	0.80[AMR][1000 genomes]
rs7234849	0.83[AMR][1000 genomes]
rs7241727	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8084642	1.00[CEU][hapmap];0.81[AMR][1000 genomes]
rs8097599	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9946321	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9954239	0.92[CEU][hapmap];0.81[AMR][1000 genomes]
rs9959560	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30379800-30383000	Enhancers	HepG2	liver
2	chr18:30380400-30385000	Enhancers	Primary B cells from peripheral blood	blood
3	chr18:30380600-30381800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr18:30380600-30385200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr18:30380800-30383200	Enhancers	Fetal Kidney	kidney
6	chr18:30381000-30384400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr18:30381000-30384800	Enhancers	Primary B cells from cord blood	blood
8	chr18:30381200-30382200	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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